RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 YY1AP1Q9H869 796 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 ADA2Q9NZK5 511 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 TSR3Q9UJK0 312 aaKnown RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 BARX2Q9UMQ3 279 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-202ENST00000413872 FAM86B1E9PN63 330 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 SUPT3HO75486 399 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 FAM86B2P0C5J1 330 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 STX3Q13277 289 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 AGBL2Q5U5Z8 902 aa17.98■□□□□ 0.47
PHRF1-202ENST00000413872 A0A087X0T9 212 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 SLC15A5A6NIM6 579 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 C2orf81A6NN90 581 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 ASS1P00966 412 aaKnown RBP17.97■□□□□ 0.47
PHRF1-202ENST00000413872 FAM228BP0C875 321 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 CXCL8P10145 99 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 PTK7Q13308 1070 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 C3orf62Q6ZUJ4 267 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 ZDHHC17Q8IUH5 632 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 HERC6Q8IVU3 1022 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 CRLS1Q9UJA2 301 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 GRID1Q9ULK0 1009 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 KRT16P08779 473 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 KRT4P19013 534 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 OVOS1Q6IE37 1185 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 TASP1Q9H6P5 420 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 INTS13Q9NVM9 706 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 PCDHB5Q9Y5E4 795 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 MYL2P10916 166 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 WASHC5Q12768 1159 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 RBM43Q6ZSC3 357 aaKnown RBP17.97■□□□□ 0.47
PHRF1-202ENST00000413872 TMC7Q7Z402 723 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 FAM71DQ8N9W8 422 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 ZNF669Q96BR6 464 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-202ENST00000413872 SYT15Q9BQS2 421 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 UBXN6Q9BZV1 441 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 STOML1Q9UBI4 398 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 TRIM10Q9UDY6 481 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 SLC25A13Q9UJS0 675 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.97■□□□□ 0.47
PHRF1-202ENST00000413872 F8VZ95 297 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 ITGA8P53708 1063 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 LRRC14Q15048 493 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 TFDP3Q5H9I0 405 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 TTC39BQ5VTQ0 682 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-202ENST00000413872 MRNIPQ6NTE8 343 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 MIB1Q86YT6 1006 aa17.97■□□□□ 0.47
PHRF1-202ENST00000413872 RAD51CO43502 376 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 SMAD1Q15797 465 aaKnown RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 TEKT4Q8WW24 435 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 KCNF1Q9H3M0 494 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 NCAM2O15394 837 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 OXCT1P55809 520 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 PCBP1Q15365 356 aaKnown RBP eCLIP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 UNC45BQ8IWX7 931 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 TLR8Q9NR97 1041 aaKnown RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 FAM47DPA6NHR8 397 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 RNASEH1O60930 286 aaKnown RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 APOA4P06727 396 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 AVPR1AP37288 418 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 BRSK2Q8IWQ3 736 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 FAM172AQ8WUF8 416 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 DACT3Q96B18 629 aaPredicted RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 ANGPT2O15123 496 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 AMHP03971 560 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 GEMIN4P57678 1058 aaKnown RBP17.96■□□□□ 0.47
PHRF1-202ENST00000413872 ZRANB3Q5FWF4 1079 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 HIPK4Q8NE63 616 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 COG4Q9H9E3 785 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 SNTG2Q9NY99 539 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 UMODL1Q5DID0 1318 aa17.96■□□□□ 0.47
PHRF1-202ENST00000413872 HDAC4P56524 1084 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 ZBTB41Q5SVQ8 909 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 LCA5Q86VQ0 697 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 DPF3Q92784 378 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 PKD2L2Q9NZM6 624 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 GCNT1Q02742 428 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 CDKAL1Q5VV42 579 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 TINF2Q9BSI4 451 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 TMEM39AQ9NV64 488 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 CD274Q9NZQ7 290 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 TTLL13PA6NNM8 815 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 PROSCO94903 275 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 PRLRP16471 622 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 CNTN2Q02246 1040 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 ADCK2Q7Z695 626 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 VSIG10LQ86VR7 867 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 DDX43Q9NXZ2 648 aaKnown RBP17.95■□□□□ 0.46
PHRF1-202ENST00000413872 NOP53Q9NZM5 478 aaKnown RBP17.95■□□□□ 0.46
PHRF1-202ENST00000413872 FAF1Q9UNN5 650 aaPredicted RBP17.95■□□□□ 0.46
PHRF1-202ENST00000413872 TRIM17Q9Y577 477 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 HEATR9A2RTY3 570 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 PIK3CDO00329 1044 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 MDH1BQ5I0G3 518 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 RRM2BQ7LG56 351 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 CFAP73A6NFT4 308 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms