RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 MGAT1P26572 445 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 MSX2P35548 267 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 NPTX2P47972 431 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TSPY1Q01534 308 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 ROR1Q01973 937 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 RAB30Q15771 203 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 MEA1Q16626 185 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 HAUS3Q68CZ6 603 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TANGO2Q6ICL3 276 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 LIN54Q6MZP7 749 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 DRICH1Q6PGQ1 229 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 LCNL1Q6ZST4 164 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 ZSCAN30Q86W11 494 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 ELOA2Q8IYF1 753 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 D2HGDHQ8N465 521 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TCP11L2Q8N4U5 519 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 FITM2Q8N6M3 262 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 RNF169Q8NCN4 708 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 MDGA1Q8NFP4 955 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 OR52N2Q8NGI0 321 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SPPL3Q8TCT6 385 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 DDX17Q92841 729 aaKnown RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 HVCN1Q96D96 273 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SNX22Q96L94 193 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 KCNC2Q96PR1 638 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 TREX2Q9BQ50 279 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 DPH1Q9BZG8 443 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 GPR35Q9HC97 309 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 PREBQ9HCU5 417 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 MRGBPQ9NV56 204 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 PPP4R1LQ9P1A2 415 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 POGKQ9P215 609 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 IGSF9Q9P2J2 1179 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SRRDQ9UH36 339 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SRP68Q9UHB9 627 aaKnown RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 FEM1BQ9UK73 627 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SCAF8Q9UPN6 1271 aaKnown RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 ZFR2Q9UPR6 939 aaKnown RBP5.11□□□□□ -1.59
BRCA1-204ENST00000412061 SH3BP1Q9Y3L3 701 aa5.11□□□□□ -1.59
BRCA1-204ENST00000412061 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 CDHR4A6H8M9 788 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 PGPEP1LA6NFU8 196 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 ZNF785A8K8V0 405 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 F5H0A9 414 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 THAP12O43422 761 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 USO1O60763 962 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 INMTO95050 263 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 NDST3O95803 873 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 PLATP00750 562 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 ANXA2P07355 339 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 AKR1B1P15121 316 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 MAN2A2P49641 1150 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 PAPOLAP51003 745 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 DRG2P55039 364 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 PSMC1P62191 440 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 MXRA7P84157 204 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 FOXL1Q12952 345 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 TBC1D10BQ4KMP7 808 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 SLC44A4Q53GD3 710 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 UTP14CQ5TAP6 766 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 RRAGBQ5VZM2 374 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 TCTN3Q6NUS6 607 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 CCDC129Q6ZRS4 1044 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 POLNQ7Z5Q5 900 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 CIR1Q86X95 450 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 HERC6Q8IVU3 1022 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 FUKQ8N0W3 1084 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 ANKRD35Q8N283 1001 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 MB21D1Q8N884 522 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 PCSK9Q8NBP7 692 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 CYP2W1Q8TAV3 490 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 TBC1D15Q8TC07 691 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 OTUD7AQ8TE49 926 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 SCAMP4Q969E2 229 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 ATP6V1E2Q96A05 226 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 NMD3Q96D46 503 aaKnown RBP5.1□□□□□ -1.59
BRCA1-204ENST00000412061 LRRC46Q96FV0 321 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 NSMCE4AQ9NXX6 385 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 ARHGAP26Q9UNA1 814 aa5.1□□□□□ -1.59
BRCA1-204ENST00000412061 HMX3A6NHT5 357 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 B4DLN1 442 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 BTN3A1O00481 513 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 DOK2O60496 412 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 AGFG2O95081 481 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ABHD16AO95870 558 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CHEK2O96017 543 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 MT-ND5P03915 603 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ITGB1P05556 798 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 MYCLP12524 364 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SLC6A2P23975 617 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 OAS2P29728 719 aaKnown RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 STAT1P42224 750 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CASP6P55212 293 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 HHEXQ03014 270 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SLC13A2Q13183 592 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 RAB32Q13637 225 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 PLCB4Q15147 1175 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CCDC92Q53HC0 331 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 DCAF17Q5H9S7 520 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms