RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 BZW2Q9Y6E2 419 aaKnown RBP16.71■□□□□ 0.27
AP001056.1-201ENST00000411956 PATJQ8NI35 1801 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 AP1G2O75843 785 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 C1RP00736 705 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 HAPLN1P10915 354 aaPredicted RBP16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 NPR3P17342 541 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 MAGEA11P43364 429 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 CDK17Q00537 523 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 CCDC173Q0VFZ6 552 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 BST2Q10589 180 aaKnown RBP16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 DUSP4Q13115 394 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 MGAT5BQ3V5L5 792 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 TCEAL5Q5H9L2 206 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 CLEC20AQ6ZU45 233 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 PASD1Q8IV76 773 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 ANKRD52Q8NB46 1076 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 ZMIZ2Q8NF64 920 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 CDCA3Q99618 268 aaPredicted RBP16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 SMOQ99835 787 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 DUSP16Q9BY84 665 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 SLC27A5Q9Y2P5 690 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 MTCH2Q9Y6C9 303 aa16.7■□□□□ 0.26
AP001056.1-201ENST00000411956 SSU72P8A0A1W2PR75 194 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 SOAT2O75908 522 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 BEST1O76090 585 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 SPATA31D3P0C874 917 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 SETSIPP0DME0 302 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 EPCAMP16422 314 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 POU3F3P20264 500 aaPredicted RBP16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 GPR15P49685 360 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 MAP3K7CLP57077 242 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 PDE4CQ08493 712 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 VSTM1Q6UX27 236 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 SPATA31D4Q6ZUB0 917 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 Q7L0L9 218 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 KREMEN2Q8NCW0 462 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 CHP1Q99653 195 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 CSNK1G1Q9HCP0 422 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 DMAP1Q9NPF5 467 aaPredicted RBP16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 YIPF1Q9Y548 306 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 INSL5Q9Y5Q6 135 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
AP001056.1-201ENST00000411956 F8VP50 259 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 TULP2O00295 520 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 DDX3XO00571 662 aaKnown RBP eCLIP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 PRRG1O14668 218 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 XPO1O14980 1071 aaKnown RBP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 TRIM66O15016 1216 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 CYP1A1P04798 512 aaPredicted RBP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 C8AP07357 584 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 ELF1P32519 619 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 CDH5P33151 784 aaPredicted RBP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 GTF2F1P35269 517 aaKnown RBP eCLIP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 EIF4A3P38919 411 aaKnown RBP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 GRIK1P39086 918 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 GPD2P43304 727 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 NOMO3P69849 1222 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 HYAL1Q12794 435 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 LIN9Q5TKA1 542 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 TRIM72Q6ZMU5 477 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 TMEM139Q8IV31 216 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 SCN4BQ8IWT1 228 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 SLC7A14Q8TBB6 771 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 KCNK16Q96T55 309 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 GAS2L1Q99501 681 aaPredicted RBP16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 CDH23Q9H251 3354 aa16.68■□□□□ 0.26
AP001056.1-201ENST00000411956 LSM8O95777 96 aaKnown RBP16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 ATF6P18850 670 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 IGFBP4P22692 258 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 ANXA13P27216 316 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 PLA2G4AP47712 749 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 TUFMP49411 452 aaKnown RBP16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 SLC8A3P57103 927 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 KCNC3Q14003 757 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 DDR2Q16832 855 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 CLEC16AQ2KHT3 1053 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 LLGL2Q6P1M3 1020 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 CYP26C1Q6V0L0 522 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 CCDC149Q6ZUS6 474 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 WDTC1Q8N5D0 677 aa16.67■□□□□ 0.26
AP001056.1-201ENST00000411956 VN1R2Q8NFZ6 395 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms