RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 RAD23BP54727 409 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 KCNJ12Q14500 433 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 PTPN21Q16825 1174 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 CYP4A22Q5TCH4 519 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 ARHGAP17Q68EM7 881 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 POTEHQ6S545 545 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 TMEM150AQ86TG1 271 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 EHBP1Q8NDI1 1231 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 TUBGCP2Q9BSJ2 902 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 DNAI2Q9GZS0 605 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 INTS2Q9H0H0 1204 aaKnown RBP14.88□□□□□ -0.03
GYPC-203ENST00000409836 NDST4Q9H3R1 872 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
GYPC-203ENST00000409836 SAMSN1Q9NSI8 373 aaKnown RBP14.88□□□□□ -0.03
GYPC-203ENST00000409836 IL37Q9NZH6 218 aa14.88□□□□□ -0.03
GYPC-203ENST00000409836 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
GYPC-203ENST00000409836 PI4K2BG5E9Z4 385 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 TADA3O75528 432 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 BDNFP23560 247 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 FCARP24071 287 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
GYPC-203ENST00000409836 MTIF2P46199 727 aaKnown RBP14.87□□□□□ -0.03
GYPC-203ENST00000409836 GPR15P49685 360 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 CACNA2D1P54289 1103 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 VWA3BQ502W6 1294 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 DPY19L2P1Q6NXN4 242 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 MTSS1LQ765P7 747 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 APTXQ7Z2E3 356 aaKnown RBP14.87□□□□□ -0.03
GYPC-203ENST00000409836 HS6ST3Q8IZP7 471 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 TCEAL4Q96EI5 215 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 GPR88Q9GZN0 384 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 NAT10Q9H0A0 1025 aaKnown RBP14.87□□□□□ -0.03
GYPC-203ENST00000409836 KRT82Q9NSB4 513 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 EHD2Q9NZN4 543 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
GYPC-203ENST00000409836 LRRC10BA6NIK2 292 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 SLC38A8A6NNN8 435 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 F8VP50 259 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 DCXO43602 365 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 F11P03951 625 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 PAEPP09466 180 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 PFKLP17858 780 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 RFX1P22670 979 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■□□□□ 10.9
GYPC-203ENST00000409836 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
GYPC-203ENST00000409836 CYP27A1Q02318 531 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 MEA1Q16626 185 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 DDR2Q16832 855 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 EXOC3L4Q17RC7 722 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 PHLDB3Q6NSJ2 640 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 GBP6Q6ZN66 633 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 ARHGEF19Q8IW93 802 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 SLC2A14Q8TDB8 520 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■■□ 24.2
GYPC-203ENST00000409836 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 KREMEN1Q96MU8 473 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 SIX2Q9NPC8 291 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 COMMD8Q9NX08 183 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 APEX2Q9UBZ4 518 aa14.86□□□□□ -0.03
GYPC-203ENST00000409836 ZNF318Q5VUA4 2279 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 HHLA1C9JL84 531 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CLDN5O00501 218 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 ECI2O75521 394 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CLSTN1O94985 981 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CAVIN2O95810 425 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CCDC130P13994 396 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CD58P19256 250 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 PON1P27169 355 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 KRT31Q15323 416 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 CLEC20AQ6ZU45 233 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 DENND5BQ6ZUT9 1274 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 UBALD2Q8IYN6 164 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 PPM1KQ8N3J5 372 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 C12orf29Q8N999 325 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 OVCA2Q8WZ82 227 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 SHC3Q92529 594 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 SMOQ99835 787 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 KCNK12Q9HB15 430 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.85□□□□□ -0.033e-6■■■■■ 65.1
GYPC-203ENST00000409836 FANCLQ9NW38 375 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 LIMA1Q9UHB6 759 aaKnown RBP14.85□□□□□ -0.03
GYPC-203ENST00000409836 MUTYHQ9UIF7 546 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 KIAA1257Q9ULG3 409 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 DAAM1Q9Y4D1 1078 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 ZDBF2Q9HCK1 2354 aa14.85□□□□□ -0.03
GYPC-203ENST00000409836 A0A1W2PRU2 124 aa14.84□□□□□ -0.03
GYPC-203ENST00000409836 DLL1O00548 723 aa14.84□□□□□ -0.03
GYPC-203ENST00000409836 RTN3O95197 1032 aaPredicted RBP14.84□□□□□ -0.03
GYPC-203ENST00000409836 FAM200BP0CF97 657 aa14.84□□□□□ -0.03
GYPC-203ENST00000409836 ALADP13716 330 aa14.84□□□□□ -0.03
GYPC-203ENST00000409836 NPR3P17342 541 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms