RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 F8VP50 259 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 NOL4O94818 638 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 ASGR2P07307 311 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 CCR2P41597 374 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 MYL5Q02045 173 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 GCNT1Q02742 428 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 TDGQ13569 410 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 HTR4Q13639 388 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 TEAD2Q15562 447 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 EXOC3L4Q17RC7 722 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 SDHAF4Q5VUM1 108 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 GBP6Q6ZN66 633 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 DENND5BQ6ZUT9 1274 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 EHBP1Q8NDI1 1231 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 TCEAL4Q96EI5 215 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 MCRS1Q96EZ8 462 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 ARID3AQ99856 593 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 TUBGCP2Q9BSJ2 902 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 LRRC3Q9BY71 257 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 INTS2Q9H0H0 1204 aaKnown RBP11.58□□□□□ -0.56
CHMP3-205ENST00000409810 KCNK12Q9HB15 430 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 ZNF334Q9HCZ1 680 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-205ENST00000409810 DMAP1Q9NPF5 467 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-205ENST00000409810 KRT82Q9NSB4 513 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 FAM49BQ9NUQ9 324 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ANHXE9PGG2 379 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 CLDN5O00501 218 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 PES1O00541 588 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 AP1G2O75843 785 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 CCDC130P13994 396 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 HMGA1P17096 107 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 PDE6CP51160 858 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 SLC8A3P57103 927 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ZXDAP98168 799 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ORC1Q13415 861 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 VWA3BQ502W6 1294 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 GPR158Q5T848 1215 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 GAREM2Q75VX8 874 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ENOSF1Q7L5Y1 443 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 FUKQ8N0W3 1084 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 SLC2A14Q8TDB8 520 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 GPR152Q8TDT2 470 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 MRPS31Q92665 395 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 E2F7Q96AV8 911 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 CYFIP2Q96F07 1278 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM176AQ96HP8 235 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 HEXIM2Q96MH2 286 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 TWNKQ96RR1 684 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 C1QTNF1Q9BXJ1 281 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 SAMSN1Q9NSI8 373 aaKnown RBP11.57□□□□□ -0.56
CHMP3-205ENST00000409810 DUSP12Q9UNI6 340 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 NUMBLQ9Y6R0 609 aa11.57□□□□□ -0.56
CHMP3-205ENST00000409810 HELZP42694 1942 aaKnown RBP11.56□□□□□ -0.56
CHMP3-205ENST00000409810 MOSPD3O75425 235 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 TECTAO75443 2155 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ECI2O75521 394 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 GJA1P17302 382 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ADORA2BP29275 332 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 PPP3CCP48454 512 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ANO6Q4KMQ2 910 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 TRIM65Q6PJ69 517 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM270Q6UE05 265 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 C12orf29Q8N999 325 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 SLC4A11Q8NBS3 891 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 STKLD1Q8NE28 680 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ZSCAN18Q8TBC5 510 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-205ENST00000409810 WHAMMQ8TF30 809 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 EDAQ92838 391 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 JAKMIP2Q96AA8 810 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ELSPBP1Q96BH3 223 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 BPIFA3Q9BQP9 254 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 CRACR2AQ9BSW2 395 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 NDST4Q9H3R1 872 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 TASP1Q9H6P5 420 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 PNPLA8Q9NP80 782 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
CHMP3-205ENST00000409810 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms