RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SFMBT2Q5VUG0 894 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 SLC7A14Q8TBB6 771 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 EPS8L1Q8TE68 723 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 CPLX3Q8WVH0 158 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 SYN2Q92777 582 aaPredicted RBP17.62■□□□□ 0.41
SUMO1-208ENST00000409627 SEPT5Q99719 369 aaPredicted RBP17.62■□□□□ 0.41
SUMO1-208ENST00000409627 RHOBTB2Q9BYZ6 727 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 CSNK1G1Q9HCP0 422 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
SUMO1-208ENST00000409627 TRIM66O15016 1216 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 AP1G2O75843 785 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 PAPLNO95428 1278 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 HNRNPA1P09651 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
SUMO1-208ENST00000409627 KRT9P35527 623 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 BCAT1P54687 386 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 RPL10AP62906 217 aaKnown RBP17.61■□□□□ 0.41
SUMO1-208ENST00000409627 PLD1Q13393 1074 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 ASIC2Q16515 512 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 GOLGA7BQ2TAP0 167 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 PPM1LQ5SGD2 360 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 ZNF677Q86XU0 584 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 ANKRD52Q8NB46 1076 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 PABPC5Q96DU9 382 aaKnown RBP17.61■□□□□ 0.41
SUMO1-208ENST00000409627 CEP295NLQ96MC4 621 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 DUSP16Q9BY84 665 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 SFXN1Q9H9B4 322 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 DMAP1Q9NPF5 467 aaPredicted RBP17.61■□□□□ 0.41
SUMO1-208ENST00000409627 ZDHHC7Q9NXF8 308 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 HESX1Q9UBX0 185 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 NOCTQ9UK39 431 aaKnown RBP17.61■□□□□ 0.41
SUMO1-208ENST00000409627 PCDHGC3Q9UN70 934 aa17.61■□□□□ 0.41
SUMO1-208ENST00000409627 MFAP3LO75121 409 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 MICAL2O94851 1124 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 POU2F2P09086 479 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 NPR3P17342 541 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 GRIK1P39086 918 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 PRKCIP41743 596 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 ALDH1A3P47895 512 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 PKDCCQ504Y2 493 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 E4F1Q66K89 784 aaPredicted RBP17.6■□□□□ 0.41
SUMO1-208ENST00000409627 ANKRD54Q6NXT1 300 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 CLEC20AQ6ZU45 233 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 NOP9Q86U38 636 aaKnown RBP17.6■□□□□ 0.41
SUMO1-208ENST00000409627 TTC30AQ86WT1 665 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 CNGA4Q8IV77 575 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 CMASQ8NFW8 434 aaPredicted RBP17.6■□□□□ 0.41
SUMO1-208ENST00000409627 DDX1Q92499 740 aaKnown RBP17.6■□□□□ 0.41
SUMO1-208ENST00000409627 C8orf48Q96LL4 319 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 DNAJC7Q99615 494 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 SMOQ99835 787 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 CLDND1Q9NY35 253 aa17.6■□□□□ 0.41
SUMO1-208ENST00000409627 AKR1B15C9JRZ8 316 aaPredicted RBP17.59■□□□□ 0.41
SUMO1-208ENST00000409627 F8VP50 259 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 M0QYV0 167 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SOAT2O75908 522 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 LRG1P02750 347 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 HOXB8P17481 243 aaPredicted RBP17.59■□□□□ 0.41
SUMO1-208ENST00000409627 ATF6P18850 670 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 ANXA13P27216 316 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 HNRNPH3P31942 346 aaKnown RBP17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SLC8A3P57103 927 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 CDR2Q01850 454 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 ARID5AQ03989 594 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 BST2Q10589 180 aaKnown RBP17.59■□□□□ 0.41
SUMO1-208ENST00000409627 TWF1Q12792 350 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 GPIHBP1Q8IV16 184 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SCN4BQ8IWT1 228 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 ZMIZ2Q8NF64 920 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SPATA17Q96L03 361 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 PNPLA8Q9NP80 782 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 IMPACTQ9P2X3 320 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SZT2Q5T011 3432 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 C2orf16Q68DN1 1984 aa17.59■□□□□ 0.41
SUMO1-208ENST00000409627 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 TBX10O75333 385 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 RFPL2O75678 378 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 BEST1O76090 585 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 LTBRP36941 435 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 GPR15P49685 360 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 EPHB3P54753 998 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 DDR2Q16832 855 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 OR8K1Q8NGG5 319 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 SLC20A1Q8WUM9 679 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 KCNK16Q96T55 309 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 UBXN6Q9BZV1 441 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 LHX5Q9H2C1 402 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 ABHD10Q9NUJ1 306 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 CLEC1BQ9P126 229 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 ASB3Q9Y575 518 aa17.58■□□□□ 0.4
SUMO1-208ENST00000409627 ZNF638Q14966 1978 aaKnown RBP17.58■□□□□ 0.4
SUMO1-208ENST00000409627 MYO16Q9Y6X6 1858 aa17.57■□□□□ 0.4
SUMO1-208ENST00000409627 XPO1O14980 1071 aaKnown RBP17.57■□□□□ 0.4
SUMO1-208ENST00000409627 XYLBO75191 536 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms