RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 KLHDC9Q8NEP7 349 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 APPL2Q8NEU8 664 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 OR6B3Q8NGW1 331 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 CPXM1Q96SM3 734 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 MRPL45Q9BRJ2 306 aaKnown RBP6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 SNX25Q9H3E2 840 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 ASNSD1Q9NWL6 643 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 KLK14Q9P0G3 267 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 TUBGCP4Q9UGJ1 667 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 HMGXB4Q9UGU5 601 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 CYTH4Q9UIA0 394 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 TSPAN16Q9UKR8 245 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 ST3GAL5Q9UNP4 418 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 CDY2AQ9Y6F7 541 aa6.61□□□□□ -1.35
GTF3C3-202ENST00000409364 TCRBV7S2A1N4TA0A589 114 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 A8MXQ7 604 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GOLGA8SH3BPF8 625 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 H3BQF6 201 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 AGPSO00116 658 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PPEF2O14830 753 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF623O75123 536 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GJB6O95452 261 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GAS8O95995 478 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GNRH1P01148 92 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 CHRNA1P02708 482 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ITIH2P19823 946 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PAX3P23760 479 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ECHS1P30084 290 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PTPN7P35236 360 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PCK1P35558 622 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF143P52747 638 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 LILRA4P59901 499 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 KLF1Q13351 362 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ORC1Q13415 861 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ARHGEF6Q15052 776 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PPP1R7Q15435 360 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 PTGISQ16647 500 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GLRA4Q5JXX5 417 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 TTC27Q6P3X3 843 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 DRICH1Q6PGQ1 229 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 LRIG3Q6UXM1 1119 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 LIMS2Q7Z4I7 341 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 MRPL10Q7Z7H8 261 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 RNF180Q86T96 592 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 TMEM110Q86TL2 294 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ACOT1Q86TX2 421 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ZDHHC17Q8IUH5 632 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 TOP6BLQ8N6T0 577 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ANKRD52Q8NB46 1076 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 UBA3Q8TBC4 463 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 SLC35F5Q8WV83 523 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 C1orf54Q8WWF1 131 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 TNIP3Q96KP6 325 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 FMO2Q99518 471 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 HEMGNQ9BXL5 484 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 DCLK3Q9C098 648 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 TSPYL1Q9H0U9 437 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 DPH5Q9H2P9 285 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 CYLDQ9NQC7 956 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 RNF186Q9NXI6 227 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 MTRF1LQ9UGC7 380 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 SRRDQ9UH36 339 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 ADAM21Q9UKJ8 722 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 GIT1Q9Y2X7 761 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 SQORQ9Y6N5 450 aa6.6□□□□□ -1.35
GTF3C3-202ENST00000409364 RNF40O75150 1001 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 ERBB2P04626 1255 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 THP07101 528 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 SKIP12755 728 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 RPL9P32969 192 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 SCNN1AP37088 669 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 ACADSBP45954 432 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 KCNJ1P48048 391 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 RAB27AP51159 221 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PLTPP55058 493 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 SLC8A3P57103 927 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 OGDHQ02218 1023 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CAV1Q03135 178 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF252P-AS1Q0IIN9 211 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CALCOCO2Q13137 446 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PTK7Q13308 1070 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 GOLGA7BQ2TAP0 167 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 ATP13A4Q4VNC1 1196 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TFDP3Q5H9I0 405 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PPP1R26Q5T8A7 1209 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM102AQ5T9C2 384 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 OR6B2Q6IFH4 312 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CCSAPQ6IQ19 270 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 C12orf29Q8N999 325 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TSEN2Q8NCE0 465 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 BBOF1Q8ND07 529 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PXYLP1Q8TE99 480 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms