RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NFE2Q16621 373 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-203ENST00000409225 SV2CQ496J9 727 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 ARSHQ5FYA8 562 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 HYIQ5T013 277 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 LYSMD4Q5XG99 296 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 SLC23A3Q6PIS1 610 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 PROSER1Q86XN7 944 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 HDDC3Q8N4P3 179 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 MYCT1Q8N699 235 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 ALLCQ8N6M5 410 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 ASB7Q9H672 318 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 KCND2Q9NZV8 630 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 GCNT4Q9P109 453 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 C2CD2Q9Y426 696 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 PTPRDP23468 1912 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 TNRC6BQ9UPQ9 1833 aaKnown RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 UPK3BL1B0FP48 263 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 UPK3BL2E5RIL1 263 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 H0Y626 953 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 TRIM16O95361 564 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 SEC24BO95487 1268 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 KLF8O95600 359 aaPredicted RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 ITPKAP23677 461 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 ACAT1P24752 427 aaKnown RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 TIE1P35590 1138 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 PRPHP41219 470 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 FAM193AP78312 1265 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 MRPS21P82921 87 aaKnown RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 GAB4Q2WGN9 574 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 SFTPA1Q8IWL2 248 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 TXNDC5Q8NBS9 432 aaKnown RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 LRRC15Q8TF66 581 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 LEO1Q8WVC0 666 aaPredicted RBP17.93■□□□□ 0.46
CHMP3-203ENST00000409225 HMGB4Q8WW32 186 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 MYRFLQ96LU7 910 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 REEP2Q9BRK0 252 aa17.93■□□□□ 0.46
CHMP3-203ENST00000409225 ADAMTS20P59510 1910 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 TISP43B9A030 160 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ANKRD63C9JTQ0 380 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 SGK1O00141 431 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 TULP1O00294 542 aaPredicted RBP17.92■□□□□ 0.46
CHMP3-203ENST00000409225 FAM13AO94988 1023 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 HDCP19113 662 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 CCDC142Q17RM4 750 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 SOWAHCQ53LP3 525 aaPredicted RBP17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 SCN4BQ8IWT1 228 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 PGBD3Q8N328 593 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 PDCL2Q8N4E4 241 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 FSIP1Q8NA03 581 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 KCNN1Q92952 543 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ZNF560Q96MR9 790 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ABCB6Q9NP58 842 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 POLMQ9NP87 494 aaPredicted RBP17.92■□□□□ 0.46
CHMP3-203ENST00000409225 PILRBQ9UKJ0 227 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ODF2LQ9ULJ1 636 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ARHGAP26Q9UNA1 814 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 GPSM3Q9Y4H4 160 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 GON4LQ3T8J9 2241 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 LAMA5O15230 3695 aa17.92■□□□□ 0.46
CHMP3-203ENST00000409225 ITPR1Q14643 2758 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 FAM221BA6H8Z2 402 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 OPHN1O60890 802 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 CAPNS1P04632 268 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 PI4KAP42356 2102 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 DPP6P42658 865 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 SLC6A11P48066 632 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 DHX8Q14562 1220 aaKnown RBP17.91■□□□□ 0.46
CHMP3-203ENST00000409225 MAP7D1Q3KQU3 841 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 INTS6LQ5JSJ4 861 aaKnown RBP17.91■□□□□ 0.46
CHMP3-203ENST00000409225 PDZD3Q86UT5 571 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 GPBP1Q86WP2 473 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 DEFB119Q8N690 84 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 IL17RCQ8NAC3 791 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 ACBD6Q9BR61 282 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 ZDHHC4Q9NPG8 344 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 DDX43Q9NXZ2 648 aaKnown RBP17.91■□□□□ 0.46
CHMP3-203ENST00000409225 GTF3C4Q9UKN8 822 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 SLC6A14Q9UN76 642 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 L1RE1Q9UN81 338 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 ADAMTS9Q9P2N4 1935 aa17.91■□□□□ 0.46
CHMP3-203ENST00000409225 MYMKA6NI61 221 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 LEFTY2O00292 366 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 CYP17A1P05093 508 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 TCF3P15923 654 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 ZXDBP98169 803 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 GFPT1Q06210 699 aaPredicted RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 MESP2Q0VG99 397 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 SCAPQ12770 1279 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 BYSLQ13895 437 aaKnown RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 COL28A1Q2UY09 1125 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 TMEM119Q4V9L6 283 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 EMC10Q5UCC4 262 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 RAB44Q7Z6P3 723 aaPredicted RBP17.9■□□□□ 0.46
CHMP3-203ENST00000409225 FILIP1Q7Z7B0 1213 aa17.9■□□□□ 0.46
CHMP3-203ENST00000409225 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms