RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SIRT2Q8IXJ6 389 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 SEC16BQ96JE7 1060 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 LRRC7Q96NW7 1537 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 PRRG3Q9BZD7 231 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 EPS8L2Q9H6S3 715 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 LNPEPQ9UIQ6 1025 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 AKR1B1P15121 316 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GPC1P35052 558 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MAGEA4P43358 317 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 COPAP53621 1224 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 PWP1Q13610 501 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GJC2Q5T442 439 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CAMKK2Q96RR4 588 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TBX3O15119 743 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 DYNC1LI2O43237 492 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 FNTAP49354 379 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CENPCQ03188 943 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MICU2Q8IYU8 434 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CENPTQ96BT3 561 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 RPS6KB2Q9UBS0 482 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 DGKIO75912 1065 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TMCC3Q9ULS5 477 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 GSTM1P09488 218 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ACADMP11310 421 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 KRT20P35900 424 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 DPP10Q8N608 796 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 F5H5T6 163 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 PMPCBO75439 489 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 FYNP06241 537 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CCND1P24385 295 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 DSG1Q02413 1049 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TGM3Q08188 693 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 STX5Q13190 355 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MROH9Q5TGP6 573 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 C12orf60Q5U649 245 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 HPS3Q969F9 1004 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TMEM169Q96HH4 297 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 BATF3Q9NR55 127 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CRB1P82279 1406 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 PPP1R37O75864 691 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 SRGNP10124 158 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 MYBP10242 640 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CCNG1P51959 295 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 BLOC1S5Q8TDH9 187 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 NSL1Q96IY1 281 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 CHP1Q99653 195 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ZW10O43264 779 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 PSTPIP1O43586 416 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 MAPK1P28482 360 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 GTF2H1P32780 548 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 NUDT2P50583 147 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 CYLC2Q14093 348 aaPredicted RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 IRAK1BP1Q5VVH5 260 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 SMAD5Q99717 465 aaKnown RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 SH3GL1Q99961 368 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 EIF3HO15372 352 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 TEX28O15482 410 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 BMP10O95393 424 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 TMED10P49755 219 aaKnown RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 PREPLQ4J6C6 727 aaPredicted RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 CDK5RAP1Q96SZ6 601 aaKnown RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 AFF2P51816 1311 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 NPTXRO95502 500 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 DPYDQ12882 1025 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 SNAP23O00161 211 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 TRIM13O60858 407 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 VPS26AO75436 327 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 LSP1P33241 339 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 MLH1P40692 756 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 FUT11Q495W5 492 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 BHMTQ93088 406 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms