RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
PRAME-204ENST00000403441 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
PRAME-204ENST00000403441 VPS45Q9NRW7 570 aa13.24□□□□□ -0.29
PRAME-204ENST00000403441 RBAKQ9NYW8 714 aaPredicted RBP13.24□□□□□ -0.29
PRAME-204ENST00000403441 L1RE1Q9UN81 338 aa13.24□□□□□ -0.29
PRAME-204ENST00000403441 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
PRAME-204ENST00000403441 OBSL1O75147 1896 aa13.24□□□□□ -0.29
PRAME-204ENST00000403441 CEP295Q9C0D2 2601 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 RHOBTB1O94844 696 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 GCNT3O95395 438 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 LDHAP00338 332 aaKnown RBP13.23□□□□□ -0.29
PRAME-204ENST00000403441 KRT19P08727 400 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
PRAME-204ENST00000403441 CYP2F1P24903 491 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 GJA4P35212 333 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 LHX1P48742 406 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 PDE6CP51160 858 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 GALK1P51570 392 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 KRT85P78386 507 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 EHHADHQ08426 723 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 USP4Q13107 963 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 NR1H3Q13133 447 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 KCNB1Q14721 858 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
PRAME-204ENST00000403441 CFAP221Q4G0U5 840 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 PLA2G2CQ5R387 149 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
PRAME-204ENST00000403441 SYT13Q7L8C5 426 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 ADGRF2Q8IZF7 708 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 CSGALNACT2Q8N6G5 542 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 PDILTQ8N807 584 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 C1orf127Q8N9H9 656 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 CD101Q93033 1021 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 FUBP3Q96I24 572 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRAME-204ENST00000403441 MYRFLQ96LU7 910 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
PRAME-204ENST00000403441 TADA3O75528 432 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 GARTP22102 1010 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 ME1P48163 572 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 RBP5P82980 135 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 PSMD2Q13200 908 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 ALCAMQ13740 583 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 DMC1Q14565 340 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 ZNF77Q15935 545 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 PLK5Q496M5 336 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 RNF43Q68DV7 783 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 TOP6BLQ8N6T0 577 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 IQUBQ8NA54 791 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
PRAME-204ENST00000403441 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 FBRSL1Q9HCM7 1045 aaKnown RBP13.22□□□□□ -0.29
PRAME-204ENST00000403441 RXFP3Q9NSD7 469 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 GDAP2Q9NXN4 497 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 TBC1D7Q9P0N9 293 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 GTF3C4Q9UKN8 822 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 ATP6V1DQ9Y5K8 247 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 SNX9Q9Y5X1 595 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 WNT6Q9Y6F9 365 aa13.22□□□□□ -0.29
PRAME-204ENST00000403441 TM4SF5O14894 197 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 IDEP14735 1019 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 CMA1P23946 247 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 PMLP29590 882 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 GBP1P32455 592 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 MAGEA11P43364 429 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 WNT7BP56706 349 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 SHC2P98077 582 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 CREB5Q02930 508 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 KCNA1Q09470 495 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.29
PRAME-204ENST00000403441 NAIF1Q69YI7 327 aaPredicted RBP13.21□□□□□ -0.29
PRAME-204ENST00000403441 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 TSTD1Q8NFU3 115 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 SH3RF2Q8TEC5 729 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 PKMYT1Q99640 499 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 C7orf25Q9BPX7 421 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 EDEM2Q9BV94 578 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 MTMR12Q9C0I1 747 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
PRAME-204ENST00000403441 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
PRAME-204ENST00000403441 SMOC1Q9H4F8 434 aa13.21□□□□□ -0.29
PRAME-204ENST00000403441 POLR3BQ9NW08 1133 aaPredicted RBP13.21□□□□□ -0.29
PRAME-204ENST00000403441 GOLGA8IPA6NC78 632 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 GOLGA8JA6NMD2 632 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 GABRDO14764 452 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
PRAME-204ENST00000403441 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
PRAME-204ENST00000403441 NFATC1O95644 943 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms