RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 GLIS1Q8NBF1 620 aa27.76■■■□□ 2.03
CGREF1-203ENST00000402394 USP6NLQ92738 828 aa27.76■■■□□ 2.03
CGREF1-203ENST00000402394 FRMD8P1Q9BZ68 369 aaPredicted RBP27.76■■■□□ 2.03
CGREF1-203ENST00000402394 HES2Q9Y543 173 aa27.76■■■□□ 2.03
CGREF1-203ENST00000402394 SNX9Q9Y5X1 595 aa27.76■■■□□ 2.03
CGREF1-203ENST00000402394 DNALI1O14645 258 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 MIPP30301 263 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 PCK1P35558 622 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 MMP13P45452 471 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 IFI35P80217 286 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 KCNT1Q5JUK3 1230 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 CEP128Q6ZU80 1094 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 BBS12Q6ZW61 710 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 NLRP14Q86W24 1093 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 ZCCHC9Q8N567 271 aaKnown RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 CMASQ8NFW8 434 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 NXF3Q9H4D5 531 aaKnown RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 ASNSD1Q9NWL6 643 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 NINJ2Q9NZG7 142 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 SCN1AP35498 2009 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 DOCK3Q8IZD9 2030 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 EBAG9O00559 213 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 RNF8O76064 485 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 ECM2O94769 699 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 SEC24CP53992 1094 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 HUNKP57058 714 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 IRX5P78411 483 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 GOLGA7BQ2TAP0 167 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 PKDCCQ504Y2 493 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 C12orf29Q8N999 325 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 MYCBPAPQ8TBZ2 947 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 DNAJB3Q8WWF6 145 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 C18orf25Q96B23 403 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 HAUS1Q96CS2 278 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 PWWP2AQ96N64 755 aa27.75■■■□□ 2.03
CGREF1-203ENST00000402394 DNAJC17Q9NVM6 304 aaKnown RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 RRP15Q9Y3B9 282 aaKnown RBP27.75■■■□□ 2.03
CGREF1-203ENST00000402394 E5RJQ4 531 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 TRAPPC3O43617 180 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 RECQL4O94761 1208 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 TRUB2O95900 331 aaKnown RBP27.74■■■□□ 2.03
CGREF1-203ENST00000402394 SLCO1A2P46721 670 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 CPT1AP50416 773 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 ARSEP51690 589 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 KYNUQ16719 465 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 TTC13Q8NBP0 860 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 CENPTQ96BT3 561 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 SERPINB12Q96P63 405 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 CNPY3Q9BT09 278 aa27.74■■■□□ 2.03
CGREF1-203ENST00000402394 C2CD4BA6NLJ0 364 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 FAM107AO95990 144 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 GPD1P21695 349 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 SNX17Q15036 470 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 CCL14Q16627 93 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 PPP1R26Q5T8A7 1209 aaPredicted RBP27.73■■■□□ 2.03
CGREF1-203ENST00000402394 FAM183BPQ6ZVS7 135 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 TMEM40Q8WWA1 233 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 CCT8L2Q96SF2 557 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 TRIM6Q9C030 488 aaPredicted RBP27.73■■■□□ 2.03
CGREF1-203ENST00000402394 PCSK1NQ9UHG2 260 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 USP18Q9UMW8 372 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 NME7Q9Y5B8 376 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 TCEA3O75764 348 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 ZSCAN5DPP0CG00 497 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 TAF1CQ15572 869 aaPredicted RBP27.73■■■□□ 2.03
CGREF1-203ENST00000402394 C9orf57Q5W0N0 161 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 TRNP1Q6NT89 227 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 RASAL3Q86YV0 1011 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 PCDH9Q9HC56 1237 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 UBQLN1Q9UMX0 589 aaKnown RBP27.73■■■□□ 2.03
CGREF1-203ENST00000402394 Q9Y3F1 56 aa27.73■■■□□ 2.03
CGREF1-203ENST00000402394 E7EVH7 732 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 CST8O60676 142 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 SETSIPP0DME0 302 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 GLRA4Q5JXX5 417 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 OR6B2Q6IFH4 312 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 ACOT1Q86TX2 421 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 UNC93AQ86WB7 457 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 ACTL9Q8TC94 416 aa27.72■■■□□ 2.03
CGREF1-203ENST00000402394 ZNF473Q8WTR7 871 aaKnown RBP27.72■■■□□ 2.03
CGREF1-203ENST00000402394 PPANQ9NQ55 473 aaKnown RBP27.72■■■□□ 2.03
CGREF1-203ENST00000402394 TPX2Q9ULW0 747 aaKnown RBP27.72■■■□□ 2.03
CGREF1-203ENST00000402394 GMNCA6NCL1 334 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 MANSC4A6NHS7 340 aaPredicted RBP27.71■■■□□ 2.03
CGREF1-203ENST00000402394 TREHO43280 583 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 CD48P09326 243 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 ETS1P14921 441 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 OTUD4Q01804 1114 aaKnown RBP27.71■■■□□ 2.03
CGREF1-203ENST00000402394 GPS1Q13098 491 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 LONRF1Q17RB8 773 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 TTC30AQ86WT1 665 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 KCTD6Q8NC69 237 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 TMEM121Q9BTD3 319 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 SLC4A5Q9BY07 1137 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 GJD2Q9UKL4 321 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 NDC80O14777 642 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 MYL3P08590 195 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 DYNLT1P63172 113 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 PLCB3Q01970 1234 aa27.71■■■□□ 2.03
CGREF1-203ENST00000402394 MDM1Q8TC05 714 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms