RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 DDR2Q16832 855 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 C15orf59Q2T9L4 293 aaPredicted RBP12.36□□□□□ -0.43
SKA3-203ENST00000400018 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 HFE2Q6ZVN8 426 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ANKLE1Q8NAG6 615 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 TAF4BQ92750 862 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 CARD6Q9BX69 1037 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 CWH43Q9H720 699 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ALG13Q9NP73 1137 aaKnown RBP12.36□□□□□ -0.43
SKA3-203ENST00000400018 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
SKA3-203ENST00000400018 PTPRSQ13332 1948 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 CAPN15O75808 1086 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ALDH2P05091 517 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 CCDC172P0C7W6 258 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 GPC5P78333 572 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ATP11AP98196 1134 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ENPEPQ07075 957 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 PDCLQ13371 301 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 KCNT1Q5JUK3 1230 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ZMIZ2Q8NF64 920 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 MYLPFQ96A32 169 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 TLR10Q9BXR5 811 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
SKA3-203ENST00000400018 MUC3AQ02505 3323 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 USP34Q70CQ2 3546 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
SKA3-203ENST00000400018 PSEN1P49768 467 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 CENPCQ03188 943 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 MAMLD1Q13495 774 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
SKA3-203ENST00000400018 TMEM240Q5SV17 173 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 B4GALNT4Q76KP1 1039 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
SKA3-203ENST00000400018 KIF18AQ8NI77 898 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
SKA3-203ENST00000400018 PJA2O43164 708 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 VDRP11473 427 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 COMTP21964 271 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 MMP8P22894 467 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 GGCXP38435 758 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 YWHAHQ04917 246 aaPredicted RBP12.35□□□□□ -0.43
SKA3-203ENST00000400018 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 ANKS1BQ7Z6G8 1248 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 ALG3Q92685 438 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 CFAP57Q96MR6 1250 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 NOX5Q96PH1 765 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 SMOQ99835 787 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 ALG6Q9Y672 507 aa12.35□□□□□ -0.43
SKA3-203ENST00000400018 COL4A6Q14031 1691 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 PI4K2BG5E9Z4 385 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 GABRDO14764 452 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 AP1G2O75843 785 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 TMEM253P0C7T8 217 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 FLT3P36888 993 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 PBX2P40425 430 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 FPGSQ05932 587 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 ADIGQ0VDE8 80 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 FAM102AQ5T9C2 384 aaPredicted RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 FUT10Q6P4F1 479 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 CCDC33Q8N5R6 958 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 TMEM35BQ8NCS4 154 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 PAPSS1O43252 624 aaPredicted RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 FGBP02675 491 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 TAS2R40P59535 323 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 CNGA2Q16280 664 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 XYLT1Q86Y38 959 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 LRRC57Q8N9N7 239 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 RIN2Q8WYP3 895 aaPredicted RBP12.34□□□□□ -0.43
SKA3-203ENST00000400018 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 EDEM1Q92611 657 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 NR2E1Q9Y466 385 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
SKA3-203ENST00000400018 CTAGE9A4FU28 777 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 KCNK3O14649 394 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 TACC1O75410 805 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 RPLP2P05387 115 aaKnown RBP12.33□□□□□ -0.44
SKA3-203ENST00000400018 USP17L7P0C7H9 530 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 PNPLA4P41247 253 aa12.33□□□□□ -0.44
SKA3-203ENST00000400018 BPIFB4P59827 614 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms