RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SLC12A8A0AV02 714 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TGM2P21980 687 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 MAGEA4P43358 317 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TAF6P49848 677 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAPA-202ENST00000400000 PTAR1Q7Z6K3 402 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 OSMRQ99650 979 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TNNI3P19429 210 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 KLRC2P26717 231 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 PCSK1P29120 753 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CAMK2GQ13555 558 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 COMMD2Q86X83 199 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 FAM129AQ9BZQ8 928 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 THAP2Q9H0W7 228 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CAAP1Q9H8G2 361 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 PSMC3IPQ9P2W1 217 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 VPS28Q9UK41 221 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TRIM17Q9Y577 477 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 ZCCHC11Q5TAX3 1644 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 NFIBO00712 420 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CAMTA2O94983 1202 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CAPN1P07384 714 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 HPGDP15428 266 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 NUDT2P50583 147 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 ANKS6Q68DC2 871 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TMC2Q8TDI7 906 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 FAM96AQ9H5X1 160 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 NT5MQ9NPB1 228 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 PFASO15067 1338 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 RGS5O15539 181 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.12
VAPA-202ENST00000400000 RASA1P20936 1047 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 ACAT1P24752 427 aaKnown RBP14.27□□□□□ -0.12
VAPA-202ENST00000400000 TARSP26639 723 aaKnown RBP14.27□□□□□ -0.12
VAPA-202ENST00000400000 ERP27Q96DN0 273 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 AAASQ9NRG9 546 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 ZNF609O15014 1411 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 DPYDQ12882 1025 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 ADAM32Q8TC27 787 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 LPAR1Q92633 364 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 HECW2Q9P2P5 1572 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 KRT8P05787 483 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 STAT4Q14765 748 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 HIST2H2ACQ16777 129 aaPredicted RBP14.27□□□□□ -0.12
VAPA-202ENST00000400000 HIST2H2AA3Q6FI13 130 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 KRT78Q8N1N4 520 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 SETD4Q9NVD3 440 aa14.27□□□□□ -0.12
VAPA-202ENST00000400000 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.27□□□□□ -0.12
VAPA-202ENST00000400000 MAGI3Q5TCQ9 1506 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 SLC11A2P49281 568 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 TRIP4Q15650 581 aaPredicted RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 KCNB2Q92953 911 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 NACC2Q96BF6 587 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 IL18RAPO95256 599 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 PDK1Q15118 436 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 SLC18A3Q16572 532 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 KHDRBS2Q5VWX1 349 aaKnown RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 ATP6V0D2Q8N8Y2 350 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 CRAMP1Q96RY5 1269 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 COLEC11Q9BWP8 271 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 SENP6Q9GZR1 1112 aaPredicted RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 EPB41L4AQ9HCS5 686 aaPredicted RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 CLK2P49760 499 aaKnown RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 CYP51A1Q16850 503 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 ADGRF2Q8IZF7 708 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 EXD1Q8NHP7 514 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 FEZF2Q8TBJ5 459 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 ZNF473Q8WTR7 871 aaKnown RBP14.27□□□□□ -0.13
VAPA-202ENST00000400000 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 TAF6LQ9Y6J9 622 aa14.27□□□□□ -0.13
VAPA-202ENST00000400000 JCADQ9P266 1359 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 GNG14A0A1W2PPG7 69 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 B2RBV5 119 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 VWA5AO00534 786 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 HBP1O60381 514 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 COL23A1Q86Y22 540 aaPredicted RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 TUBGCP3Q96CW5 907 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 FAM111AQ96PZ2 611 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 URODP06132 367 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 SCFD2Q8WU76 684 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TMEM245Q9H330 911 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 SNTG2Q9NY99 539 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TUBE1Q9UJT0 475 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 CDK12Q9NYV4 1490 aaPredicted RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms