RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 CPSF3Q9UKF6 684 aaKnown RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 AGTP01019 485 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 STAG3L1P0CL83 205 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 NDST1P52848 882 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 DRG2P55039 364 aaKnown RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 PIGWQ7Z7B1 504 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 LRRC6Q86X45 466 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 SLC4A11Q8NBS3 891 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 KCTD6Q8NC69 237 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 SPATA18Q8TC71 538 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 ARMCX1Q9P291 453 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 ANK1P16157 1881 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 MICAL2O94851 1124 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 CDH6P55285 790 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
ITSN1-211ENST00000399355 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 ZCCHC23Q6ZST2 131 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 SHCBP1LQ9BZQ2 653 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
ITSN1-211ENST00000399355 C3orf70A6NLC5 250 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 AMHP03971 560 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 ITIH2P19823 946 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 ACAT1P24752 427 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 NCALDP61601 193 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 SLC10A6Q3KNW5 377 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 PMF1Q6P1K2 205 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 RFWD2Q8NHY2 731 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 SLC13A1Q9BZW2 595 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 SETD4Q9NVD3 440 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 MAFO75444 373 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 RBP3P10745 1247 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 CCDC130P13994 396 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 LMO2P25791 158 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 ADORA2BP29275 332 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 CLDN10P78369 228 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 SLC25A11Q02978 314 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 MYO1EQ12965 1108 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 PITPNM3Q9BZ71 974 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 ETNK2Q9NVF9 386 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 TCRBV5S1A1TA0A578 114 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 STAM2O75886 525 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 GHRHRQ02643 423 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 PPP1R26Q5T8A7 1209 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 CES4AQ5XG92 561 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 TRMT10BQ6PF06 316 aaKnown RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 LVRNQ6Q4G3 990 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 C12orf50Q8NA57 414 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 AGAP11Q8TF27 550 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 WHRNQ9P202 907 aa12.32□□□□□ -0.44
ITSN1-211ENST00000399355 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-211ENST00000399355 A0A0G2JND7 137 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 OGTO15294 1046 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 HMGCRP04035 888 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 PAEPP09466 180 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 OASLQ15646 514 aaKnown RBP12.31□□□□□ -0.44
ITSN1-211ENST00000399355 CCNG2Q16589 344 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 TFDP3Q5H9I0 405 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 ISLR2Q6UXK2 745 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 MAML1Q92585 1016 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 UNKQ9C0B0 810 aaKnown RBP12.31□□□□□ -0.44
ITSN1-211ENST00000399355 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 CSADQ9Y600 493 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
ITSN1-211ENST00000399355 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 CLDN5O00501 218 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 USP12O75317 370 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 ELK3P41970 407 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 ZNF132P52740 706 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 SESN3P58005 492 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 METTL7BQ6UX53 244 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 FAM183BPQ6ZVS7 135 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 PHF13Q86YI8 300 aaPredicted RBP12.31□□□□□ -0.44
ITSN1-211ENST00000399355 KATNAL2Q8IYT4 538 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 CCDC89Q8N998 374 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 DEPDC1BQ8WUY9 529 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
ITSN1-211ENST00000399355 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
ITSN1-211ENST00000399355 MMP19Q99542 508 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms