RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ARHGAP26Q9UNA1 814 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 GABPAQ06546 454 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 GPR162Q16538 588 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 TRIM72Q6ZMU5 477 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 HDAC11Q96DB2 347 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 PWWP2AQ96N64 755 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 ATXN10Q9UBB4 475 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC12A4Q9UP95 1085 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 INPP5FQ9Y2H2 1132 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 IGSF9BQ9UPX0 1349 aa15.22■□□□□ 0.03
RPRD1A-202ENST00000399022 DGKIO75912 1065 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 VCAM1P19320 739 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 MARCKSL1P49006 195 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 OASLQ15646 514 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 KCTD17Q8N5Z5 321 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 MKL1Q969V6 931 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 TMA16Q96EY4 203 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 PAFAH2Q99487 392 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 TAGLN3Q9UI15 199 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 SNRPAP09012 282 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 SPATA31C1P0DKV0 1188 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 CASP2P42575 452 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DRG2P55039 364 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 EIF3EP60228 445 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 OCRLQ01968 901 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 SMTNL2Q2TAL5 461 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 PYDC1Q8WXC3 89 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC10A4Q96EP9 437 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DENND2DQ9H6A0 471 aaPredicted RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 COMMD3-BMI1R4GMX3 469 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 NID2Q14112 1375 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 P4HA2O15460 535 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 WFS1O76024 890 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 NPTXRO95502 500 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 KRT3P12035 628 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 RRM1P23921 792 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DLG4P78352 724 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 FLOT2Q14254 428 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 POTEAQ6S8J7 498 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 KIAA2013Q8IYS2 634 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 CCNYL1Q8N7R7 359 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DDHD1Q8NEL9 900 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 DDI1Q8WTU0 396 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 LZICQ8WZA0 190 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 CHST7Q9NS84 486 aa15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
RPRD1A-202ENST00000399022 TXNP10599 105 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 NFX1Q12986 1120 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 C1orf186Q6ZWK4 172 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 LRMDAQ9H2I8 198 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 AGO4Q9HCK5 861 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 TAS2R14Q9NYV8 317 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GRAP2O75791 330 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 APRTP07741 180 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 CREB1P16220 341 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GTF2H1P32780 548 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ARL4AP40617 200 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 PHKA2P46019 1235 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 DCTN2Q13561 401 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 TFDP2Q14188 446 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 POU5F2Q8N7G0 328 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 SEPT1Q8WYJ6 367 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ATXN7L3BQ96GX2 97 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 MMADHCQ9H3L0 296 aaPredicted RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 LRRC4Q9HBW1 653 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 PALMDQ9NP74 551 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 CYP26B1Q9NR63 512 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 RAB6BQ9NRW1 208 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 CALCAP01258 141 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 CDH6P55285 790 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 HES6Q96HZ4 224 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 STRIP2Q9ULQ0 834 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ASTN1O14525 1302 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GTPBP10A4D1E9 387 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 VIL1P09327 827 aaKnown RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 STMN1P16949 149 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 RGS2P41220 211 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 PRPSAP1Q14558 356 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 ALG3Q92685 438 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 OXNAD1Q96HP4 312 aaPredicted RBP15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 GRIP2Q9C0E4 1043 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 KCTD10Q9H3F6 313 aa15.2■□□□□ 0.02
RPRD1A-202ENST00000399022 MEI4A8MW99 385 aa15.19■□□□□ 0.02
RPRD1A-202ENST00000399022 WNT10BO00744 389 aa15.19■□□□□ 0.02
RPRD1A-202ENST00000399022 RAB27AP51159 221 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms