RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TTC39CQ8N584 583 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 KCTD6Q8NC69 237 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ACTR5Q9H9F9 607 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 DPP3Q9NY33 737 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 PCSK1NQ9UHG2 260 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ACTL7BQ9Y614 415 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 A0A1B0GUA9 196 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 STRNO43815 780 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 MIPP30301 263 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 NDST1P52848 882 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ACTN3Q08043 901 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 PDE4CQ08493 712 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ITIH4Q14624 930 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 GRIK4Q16099 956 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 CENPUQ71F23 418 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 TAX1BP1Q86VP1 789 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ANKRD42Q8N9B4 389 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 KATNBL1Q9H079 304 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ASNSD1Q9NWL6 643 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 EURLQ9NYK6 297 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 SAE1Q9UBE0 346 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 USP18Q9UMW8 372 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 MGAMO43451 1857 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 CD48P09326 243 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 RDXP35241 583 aaKnown RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 PSMC4P43686 418 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 ZNF410Q86VK4 478 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 SRRM1Q8IYB3 904 aaKnown RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 CCDC13Q8IYE1 715 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 ZBED8Q8IZ13 594 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 CMASQ8NFW8 434 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 UBA3Q8TBC4 463 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 PRCCQ92733 491 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 KAT2BQ92831 832 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 MIS12Q9H081 205 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 KIAA1257Q9ULG3 409 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 FOXO6A8MYZ6 492 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 APOC4-APOC2K7ER74 178 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 APOC2P02655 101 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 PCK1P35558 622 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 ZNF143P52747 638 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 FASTKD3Q14CZ7 662 aaKnown RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 TMED2Q15363 201 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 ANKRD20A8PQ5CZ79 823 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 RFX6Q8HWS3 928 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 RSAD2Q8WXG1 361 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 HSPH1Q92598 858 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 NT5C1AQ9BXI3 368 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 SLC45A1Q9Y2W3 748 aa14.53□□□□□ -0.08
PRAME-202ENST00000398743 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
PRAME-202ENST00000398743 RASA4BC9J798 803 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 ALOX15BO15296 676 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 RASA4O43374 803 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 SNAI1O95863 264 aaPredicted RBP14.52□□□□□ -0.08
PRAME-202ENST00000398743 TRUB2O95900 331 aaKnown RBP14.52□□□□□ -0.08
PRAME-202ENST00000398743 YBX3P16989 372 aaKnown RBP eCLIP14.52□□□□□ -0.08
PRAME-202ENST00000398743 GRM5P41594 1212 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 CTCFP49711 727 aaPredicted RBP14.52□□□□□ -0.08
PRAME-202ENST00000398743 GDF10P55107 478 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 NR1H3Q13133 447 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 HIF1AQ16665 826 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 CCDC142Q17RM4 750 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 MARCH8Q5T0T0 291 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 LCLAT1Q6UWP7 414 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 TDRPQ86YL5 185 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 PPIL6Q8IXY8 311 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 CNPY4Q8N129 248 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 CCT6BQ92526 530 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 ELAC2Q9BQ52 826 aaKnown RBP14.52□□□□□ -0.08
PRAME-202ENST00000398743 CALN1Q9BXU9 219 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 KDM4CQ9H3R0 1056 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 VPS37BQ9H9H4 285 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 NKIRAS1Q9NYS0 192 aa14.52□□□□□ -0.08
PRAME-202ENST00000398743 EVPLQ92817 2033 aa14.52□□□□□ -0.09
PRAME-202ENST00000398743 TCP11X1B4DZS4 312 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 MMP3P08254 477 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 GPD1P21695 349 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 PDIA2Q13087 525 aaKnown RBP14.51□□□□□ -0.09
PRAME-202ENST00000398743 STILQ15468 1287 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 DCAF4L1Q3SXM0 396 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 LACTB2Q53H82 288 aaPredicted RBP14.51□□□□□ -0.09
PRAME-202ENST00000398743 HP1BP3Q5SSJ5 553 aaPredicted RBP14.51□□□□□ -0.09
PRAME-202ENST00000398743 FBXW10Q5XX13 1052 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 DPP9Q86TI2 863 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 CKAP2Q8WWK9 683 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 MAML1Q92585 1016 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 CNPY3Q9BT09 278 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 PHACTR1Q9C0D0 580 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 RSAD1Q9HA92 442 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 MLXIPLQ9NP71 852 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 E5RJQ4 531 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 MCF2LO15068 1137 aa14.51□□□□□ -0.09
PRAME-202ENST00000398743 SMPD1P17405 629 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms