RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 KLK14Q9P0G3 267 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 NR1D1P20393 614 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 ZNF143P52747 638 aaPredicted RBP27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 MRPS6P82932 125 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 BYSLQ13895 437 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 SOWAHAQ2M3V2 549 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 GSTA5Q7RTV2 222 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 RSPH3Q86UC2 560 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 HOOK3Q86VS8 718 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 UPF3AQ9H1J1 476 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 EPB41L4BQ9H329 900 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 GDAP2Q9NXN4 497 aa27.09■■□□□ 1.93
SHARPIN-202ENST00000398712 E5RJQ4 531 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 GPD1P21695 349 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 ADCY2Q08462 1091 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 TRIP13Q15645 432 aaPredicted RBP27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 KRT71Q3SY84 523 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 PKDCCQ504Y2 493 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 ARHGAP17Q68EM7 881 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 TWF2Q6IBS0 349 aaKnown RBP27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 RHBDF2Q6PJF5 856 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 FAM183BPQ6ZVS7 135 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 CROCCP2Q86T23 111 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 FAM228AQ86W67 206 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 FAM118BQ9BPY3 351 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 GTF2IRD1Q9UHL9 959 aa27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 DRG1Q9Y295 367 aaKnown RBP27.08■■□□□ 1.93
SHARPIN-202ENST00000398712 C3orf70A6NLC5 250 aaPredicted RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 KPNA7A9QM74 516 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 RPS6KA5O75582 802 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 PCK1P35558 622 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 PSMC4P43686 418 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 TAF6P49848 677 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 SV2CQ496J9 727 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 DNAJC21Q5F1R6 531 aaKnown RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 TRMT10CQ7L0Y3 403 aaKnown RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 SMG8Q8ND04 991 aaKnown RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 ACSF2Q96CM8 615 aaPredicted RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 CNPY3Q9BT09 278 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 FRMD8P1Q9BZ68 369 aaPredicted RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 RNF39Q9H2S5 420 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 ANAPC5Q9UJX4 755 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 TRPV2Q9Y5S1 764 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 SCN10AQ9Y5Y9 1956 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 A8MXQ7 604 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 IL1R2P27930 398 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 ITGA8P53708 1063 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 ARFGAP2Q8N6H7 521 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 STK32AQ8WU08 396 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 FAM49BQ9NUQ9 324 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 DNPEPQ9ULA0 475 aa27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 ABT1Q9ULW3 272 aaKnown RBP27.07■■□□□ 1.92
SHARPIN-202ENST00000398712 KDELR1P24390 212 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 SMTNL2Q2TAL5 461 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 TTC30AQ86WT1 665 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 TTC13Q8NBP0 860 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 TRIB2Q92519 343 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 SLC4A5Q9BY07 1137 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 SNX25Q9H3E2 840 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 SEMA4AQ9H3S1 761 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 ZNF148Q9UQR1 794 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 CDY2AQ9Y6F7 541 aa27.06■■□□□ 1.92
SHARPIN-202ENST00000398712 C2CD4BA6NLJ0 364 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 TP73O15350 636 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 KLRC2P26717 231 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 MIPP30301 263 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 VCPP55072 806 aaKnown RBP27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 TAZQ16635 292 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 NBPF20Q3BBV1 942 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 SESTD1Q86VW0 696 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 CCDC25Q86WR0 208 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 APPL2Q8NEU8 664 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 RNF19AQ9NV58 838 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 USP18Q9UMW8 372 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 NME7Q9Y5B8 376 aa27.05■■□□□ 1.92
SHARPIN-202ENST00000398712 RIPK2O43353 540 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 TRUB2O95900 331 aaKnown RBP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 RPLP2P05387 115 aaKnown RBP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 PDGFRAP16234 1089 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 GNL1P36915 607 aaPredicted RBP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 RGS7P49802 495 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 SLC29A2Q14542 456 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 PMF1Q6P1K2 205 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 CXCL17Q6UXB2 119 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 TMEM110Q86TL2 294 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 ZDHHC17Q8IUH5 632 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 CRYBG2Q8N1P7 616 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 KCTD6Q8NC69 237 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 SLC35F5Q8WV83 523 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 RXFP2Q8WXD0 754 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 NKD2Q969F2 451 aaPredicted RBP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 BCCIPQ9P287 314 aaKnown RBP eCLIP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 RARBP10826 455 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 DESP17661 470 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 VPS41P49754 854 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 NKX3-2P78367 333 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 KCNT1Q5JUK3 1230 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 ALLCQ8N6M5 410 aa27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 CMASQ8NFW8 434 aaPredicted RBP27.04■■□□□ 1.92
SHARPIN-202ENST00000398712 KBTBD7Q8WVZ9 684 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms