RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 HBP1O60381 514 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATG13O75143 517 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 VPS26AO75436 327 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 GRAP2O75791 330 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TFRCP02786 760 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 AKR1A1P14550 325 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 HK2P52789 917 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DEFA1P59665 94 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DEFA3P59666 94 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 MRPS25P82663 173 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PPATQ06203 517 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TWF1Q12792 350 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CAMK2GQ13555 558 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 LRRC32Q14392 662 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 FASTKD1Q53R41 847 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 POTEHQ6S545 545 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 POTEGQ6S5H5 508 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 USP45Q70EL2 814 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RFX6Q8HWS3 928 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PYROXD1Q8WU10 500 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ZMAT2Q96NC0 199 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PANX3Q96QZ0 392 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RIT2Q99578 217 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 WWP1Q9H0M0 922 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TTYH1Q9H313 450 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 TMEM245Q9H330 911 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RYDENQ9NUL5 291 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 SAGE1Q9NXZ1 904 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 V9GY48 417 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 CCDC162PA2VCL2 907 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 C3orf70A6NLC5 250 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PDXKO00764 312 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ZRANB2O95218 330 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PFKMP08237 780 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 COX7A2P14406 83 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DARSP14868 501 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PRKAA2P54646 552 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DSG2Q14126 1118 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TJAP1Q5JTD0 557 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PSRC1Q6PGN9 363 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 LVRNQ6Q4G3 990 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 C16orf89Q6UX73 402 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SH3BP5LQ7L8J4 393 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SZRD1Q7Z422 152 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPATA21Q7Z572 469 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 FTMTQ8N4E7 242 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-202ENST00000398510 APBA2Q99767 749 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 POLR3FQ9H1D9 316 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RPAP3Q9H6T3 665 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RAVER2Q9HCJ3 691 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 POLE4Q9NR33 117 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ANKEF1Q9NU02 776 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPATS2LQ9NUQ6 558 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 MGAMO43451 1857 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LRRC14BA6NHZ5 514 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 H7C0C1 242 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CLTAP09496 248 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SLFN14P0C7P3 912 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 AKR1B1P15121 316 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATP5OP48047 213 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DBPQ10586 325 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 TRIM28Q13263 835 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PAGE2BQ5JRK9 111 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NBPF12Q5TAG4 269 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 NAA35Q5VZE5 725 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PLA2G4FQ68DD2 849 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PADI6Q6TGC4 694 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TRMT10CQ7L0Y3 403 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 CPA6Q8N4T0 437 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 OR6J1Q8NGC5 347 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPATA18Q8TC71 538 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 FKBP10Q96AY3 582 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RIPOR3Q96MK2 946 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 EBNA1BP2Q99848 306 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 TRIM31Q9BZY9 425 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SENP6Q9GZR1 1112 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 MIEF1Q9NQG6 463 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ERVW-1Q9UQF0 538 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPATA31A1Q5TZJ5 1347 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ZNF335Q9H4Z2 1342 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 CCL15-CCL14A0A0B4J2E2 113 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SH2B2O14492 632 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 EXTL3O43909 919 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TMCC2O75069 709 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATP4AP20648 1035 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 EPHX2P34913 555 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 IL13P35225 146 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CDK8P49336 464 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 VCPP55072 806 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 NUP107P57740 925 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 STX3Q13277 289 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ALX1Q15699 326 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CCL15Q16663 113 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SCYL2Q6P3W7 929 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RRAGAQ7L523 313 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PLEKHH3Q7Z736 793 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RASSF3Q86WH2 238 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 FAM149B1Q96BN6 582 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms