RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 NR1H3Q13133 447 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 CUL4AQ13619 759 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ALCAMQ13740 583 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 DMC1Q14565 340 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 CCDC142Q17RM4 750 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 SPATA2LQ8IUW3 424 aaPredicted RBP12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ADGRG2Q8IZP9 1017 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 RPLP0P6Q8NHW5 317 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 CCDC26Q8TAB7 109 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 FAM84AQ96KN4 292 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 CBWD1Q9BRT8 395 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 INTS13Q9NVM9 706 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ARHGAP26Q9UNA1 814 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 MORC2Q9Y6X9 1032 aaPredicted RBP12.79□□□□□ -0.36
SYNE4-203ENST00000397428 SPTBN2O15020 2390 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ATG2BQ96BY7 2078 aa12.79□□□□□ -0.36
SYNE4-203ENST00000397428 ANAPC1Q9H1A4 1944 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
SYNE4-203ENST00000397428 K7EQS6 105 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 KIAA0391O15091 583 aaKnown RBP12.78□□□□□ -0.36
SYNE4-203ENST00000397428 KCNK5O95279 499 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 GCNT3O95395 438 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 CKMP06732 381 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 IFNAR2P48551 515 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 USP4Q13107 963 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 GAB4Q2WGN9 574 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 VSTM1Q6UX27 236 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 SCN4BQ8IWT1 228 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
SYNE4-203ENST00000397428 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
SYNE4-203ENST00000397428 A0A0A0MRY4 1105 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 DCLK1O15075 740 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 CAVIN2O95810 425 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 KRT19P08727 400 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 IDEP14735 1019 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 OPRD1P41143 372 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 ELF2Q15723 593 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 DUOXA2Q1HG44 320 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 C4orf50Q6ZRC1 276 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 CCDC73Q6ZRK6 1079 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 RASSF3Q86WH2 238 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 GPD1LQ8N335 351 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 ACDQ96AP0 544 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 TTLL2Q9BWV7 592 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 CRTAC1Q9NQ79 661 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 CACNA1BQ00975 2339 aa12.77□□□□□ -0.37
SYNE4-203ENST00000397428 TPRP12270 2363 aaKnown RBP12.77□□□□□ -0.37
SYNE4-203ENST00000397428 A0A087X0B3 334 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 ZNF840PA6NDX5 716 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 ANTXRLA6NF34 631 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 PRPF6O94906 941 aaKnown RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 CST3P01034 146 aaPredicted RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 WARSP23381 471 aaKnown RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 BDNFP23560 247 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 HOXD13P35453 343 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 PPP3CCP48454 512 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 PDE6CP51160 858 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 USP46P62068 366 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 SLC7A9P82251 487 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 SURF1Q15526 300 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
SYNE4-203ENST00000397428 RNF43Q68DV7 783 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 MYO16Q9Y6X6 1858 aa12.76□□□□□ -0.37
SYNE4-203ENST00000397428 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
SYNE4-203ENST00000397428 LEFTY2O00292 366 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms