RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ANKS4BQ8N8V4 417 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 HSPH1Q92598 858 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 DDX56Q9NY93 547 aaKnown RBP24.97■■□□□ 1.59
PABPN1-202ENST00000397276 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-202ENST00000397276 BANF1O75531 89 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 ADORA2AP29274 412 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 VCPP55072 806 aaKnown RBP24.97■■□□□ 1.59
PABPN1-202ENST00000397276 SLC25A11Q02978 314 aaKnown RBP24.97■■□□□ 1.59
PABPN1-202ENST00000397276 MPP2Q14168 576 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 TAPT1Q6NXT6 567 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 XYLT1Q86Y38 959 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 ZCCHC9Q8N567 271 aaKnown RBP24.97■■□□□ 1.59
PABPN1-202ENST00000397276 TMEM176AQ96HP8 235 aa24.97■■□□□ 1.59
PABPN1-202ENST00000397276 HPDLQ96IR7 371 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 LHX5Q9H2C1 402 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 RNF19AQ9NV58 838 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 OTUD4Q01804 1114 aaKnown RBP24.96■■□□□ 1.59
PABPN1-202ENST00000397276 OASLQ15646 514 aaKnown RBP24.96■■□□□ 1.59
PABPN1-202ENST00000397276 MAP1SQ66K74 1059 aaPredicted RBP24.96■■□□□ 1.59
PABPN1-202ENST00000397276 TRPM8Q7Z2W7 1104 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 NIPA2Q8N8Q9 360 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 ACTL9Q8TC94 416 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 NSMCE1Q8WV22 266 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 MGAMO43451 1857 aa24.96■■□□□ 1.59
PABPN1-202ENST00000397276 C3orf70A6NLC5 250 aaPredicted RBP24.95■■□□□ 1.59
PABPN1-202ENST00000397276 POC1B-GALNT4F8VUJ3 575 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 GDF10P55107 478 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 TMEM62Q0P6H9 643 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 LAMC2Q13753 1193 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 TMED2Q15363 201 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 ZNF484Q5JVG2 852 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 ILDR2Q71H61 639 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 PRCCQ92733 491 aaPredicted RBP24.95■■□□□ 1.59
PABPN1-202ENST00000397276 P3H4Q92791 437 aa24.95■■□□□ 1.59
PABPN1-202ENST00000397276 HGSO14964 777 aaPredicted RBP24.95■■□□□ 1.58
PABPN1-202ENST00000397276 CILPO75339 1184 aa24.95■■□□□ 1.58
PABPN1-202ENST00000397276 UBOX5O94941 541 aa24.95■■□□□ 1.58
PABPN1-202ENST00000397276 COPS2P61201 443 aa24.95■■□□□ 1.58
PABPN1-202ENST00000397276 SH3PXD2AQ5TCZ1 1133 aa24.95■■□□□ 1.58
PABPN1-202ENST00000397276 FAXDC2Q96IV6 333 aa24.95■■□□□ 1.58
PABPN1-202ENST00000397276 GRAP2O75791 330 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 GAD2Q05329 585 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 RAB6CQ53S08 254 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 ZBED8Q8IZ13 594 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 CXorf38Q8TB03 319 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 RAB6CQ9H0N0 254 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 CXCL16Q9H2A7 254 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 SAMD15Q9P1V8 674 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 A8MUI8 341 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 MYCNP04198 464 aaPredicted RBP24.94■■□□□ 1.58
PABPN1-202ENST00000397276 ATP5DP30049 168 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 EPHX2P34913 555 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 HADHQ16836 314 aaKnown RBP24.94■■□□□ 1.58
PABPN1-202ENST00000397276 C12orf29Q8N999 325 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 KCTD6Q8NC69 237 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 CCDC77Q9BR77 488 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 SLC24A3Q9HC58 644 aa24.94■■□□□ 1.58
PABPN1-202ENST00000397276 TCP11X1B4DZS4 312 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 MCF2P10911 925 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 NRLP54845 237 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 SNAPC2Q13487 334 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 TMEM132DQ14C87 1099 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 FAM102AQ5T9C2 384 aaPredicted RBP24.93■■□□□ 1.58
PABPN1-202ENST00000397276 MAMDC4Q6UXC1 1216 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 ANKMY2Q8IV38 441 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 GPRC5AQ8NFJ5 357 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 AGAP11Q8TF27 550 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 SLC10A4Q96EP9 437 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 CALN1Q9BXU9 219 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 VPS37BQ9H9H4 285 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 EXOC1LA0A1B0GW35 172 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 CDH16O75309 829 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 PIAS1O75925 651 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 KDELR1P24390 212 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 DRICH1Q6PGQ1 229 aaPredicted RBP24.93■■□□□ 1.58
PABPN1-202ENST00000397276 KIF2BQ8N4N8 673 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 DRG1Q9Y295 367 aaKnown RBP24.93■■□□□ 1.58
PABPN1-202ENST00000397276 NEBLO76041 1014 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 MIPP30301 263 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 NDST1P52848 882 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 TNFAIP2Q03169 654 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 CDO1Q16878 200 aa24.93■■□□□ 1.58
PABPN1-202ENST00000397276 H3BRB1 525 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 ANP32DO95626 131 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 KRT7P08729 469 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 RFX6Q8HWS3 928 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 CCHCR1Q8TD31 782 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 PIWIL1Q96J94 861 aaKnown RBP24.92■■□□□ 1.58
PABPN1-202ENST00000397276 ADPGKQ9BRR6 497 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 NFKBIZQ9BYH8 718 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 TUT1Q9H6E5 874 aaKnown RBP24.92■■□□□ 1.58
PABPN1-202ENST00000397276 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.92■■□□□ 1.58
PABPN1-202ENST00000397276 DICER1Q9UPY3 1922 aaKnown RBP24.92■■□□□ 1.58
PABPN1-202ENST00000397276 CCDC189A1A4V9 331 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 RASA4BC9J798 803 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 RASA4O43374 803 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 SBF1O95248 1867 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 GPD2P43304 727 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 PDIA2Q13087 525 aaKnown RBP24.92■■□□□ 1.58
PABPN1-202ENST00000397276 STAT4Q14765 748 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms