RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 POM121L1PQ3SYA9 428 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 TMED8Q6PL24 325 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 DNAJC1Q96KC8 554 aaKnown RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 PRMT1Q99873 361 aaKnown RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 H0YC42 278 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 MSH3P20585 1137 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 GGCXP38435 758 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 TADA1Q96BN2 335 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 XYLBO75191 536 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 MARSP56192 900 aaKnown RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 KRT35Q92764 455 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF669Q96BR6 464 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 CGRRF1Q99675 332 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 NIF3L1Q9GZT8 377 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 RHBGQ9H310 441 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 NPHS2Q9NP85 383 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 SAMD9LQ8IVG5 1584 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 PSMA3P25788 255 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 B3GALNT2Q8NCR0 500 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 ATL2Q8NHH9 583 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 NLNQ9BYT8 704 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 TRABDQ9H4I3 376 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 GNG14A0A1W2PPG7 69 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 CYP2C8P10632 490 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 KLRC1P26715 233 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 LONRF1Q17RB8 773 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 TPGS1Q6ZTW0 290 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 ADCK1Q86TW2 530 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 VPS50Q96JG6 964 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 NDE1Q9NXR1 346 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 GJB7Q6PEY0 223 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 ACER1Q8TDN7 264 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 JMJD4Q9H9V9 463 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 GPRC5CQ9NQ84 441 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 EVPLLA8MZ36 301 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 MYO1CO00159 1063 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 PLD3Q8IV08 490 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 GUF1Q8N442 669 aaKnown RBP18.1■□□□□ 0.49
MCF2L-208ENST00000397030 SNTG2Q9NY99 539 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 RRP15Q9Y3B9 282 aaKnown RBP18.1■□□□□ 0.49
MCF2L-208ENST00000397030 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-208ENST00000397030 AIM2O14862 343 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 MAGI2Q86UL8 1455 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 TRIM51Q9BSJ1 452 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 MROH8Q9H579 483 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 CTNNB1P35222 781 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 GSTA3Q16772 222 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 LRRC36Q1X8D7 754 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 C4orf33Q8N1A6 199 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 KLF6Q99612 283 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-208ENST00000397030 OMDQ99983 421 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF229Q9UJW7 825 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF200P98182 395 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 ATP2C1P98194 919 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 USP39Q53GS9 565 aaKnown RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 USP13Q92995 863 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 PPP1R2P1Q96PQ5 205 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 TLR8Q9NR97 1041 aaKnown RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 SOAT2O75908 522 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 GSTM1P09488 218 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 KLRK1P26718 216 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 PTK7Q13308 1070 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 CAP2P40123 477 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 TRIP4Q15650 581 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 NT5MQ9NPB1 228 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 GPATCH2LQ9NWQ4 482 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 ZBTB39O15060 712 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 NDUFV1P49821 464 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 MYO1HQ8N1T3 1032 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 EXD1Q8NHP7 514 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 ICAM1P05362 532 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 TAL1P17542 331 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-208ENST00000397030 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 TRPC4Q9UBN4 977 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 NEU2Q9Y3R4 380 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 PCDHB9Q9Y5E1 797 aa18.09■□□□□ 0.49
MCF2L-208ENST00000397030 CHUKO15111 745 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 ABCB1P08183 1280 aaPredicted RBP18.08■□□□□ 0.49
MCF2L-208ENST00000397030 HALP42357 657 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 BACE1P56817 501 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 MRPS15P82914 257 aaKnown RBP18.08■□□□□ 0.49
MCF2L-208ENST00000397030 POMGNT2Q8NAT1 580 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 TMEM8AQ9HCN3 771 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 RIC8BQ9NVN3 520 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 SCNN1BP51168 640 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 BEX3Q00994 111 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 STK33Q9BYT3 514 aa18.08■□□□□ 0.49
MCF2L-208ENST00000397030 CCDC22O60826 627 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 STX3Q13277 289 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 NAPEPLDQ6IQ20 393 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 LPCAT1Q8NF37 534 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms