RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ZP2Q05996 745 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 ENOSF1Q7L5Y1 443 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 OTOP3Q7RTS5 596 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 FUKQ8N0W3 1084 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 TDRD5Q8NAT2 981 aaKnown RBP31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 ING5Q8WYH8 240 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 ACSF2Q96CM8 615 aaPredicted RBP31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 KREMEN1Q96MU8 473 aa31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 UHRF1Q96T88 793 aaPredicted RBP31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 LSM14BQ9BX40 385 aaKnown RBP31.2■■■□□ 2.59
CHCHD4-202ENST00000396914 F8VP50 259 aa31.19■■■□□ 2.58
CHCHD4-202ENST00000396914 ZNF197O14709 1029 aa31.19■■■□□ 2.58
CHCHD4-202ENST00000396914 AP1G2O75843 785 aa31.19■■■□□ 2.58
CHCHD4-202ENST00000396914 UBXN1Q04323 297 aa31.19■■■□□ 2.58
CHCHD4-202ENST00000396914 ITFG1Q8TB96 612 aa31.19■■■□□ 2.58
CHCHD4-202ENST00000396914 LGALS16A8MUM7 142 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 CSH1P0DML2 217 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 CSH2P0DML3 217 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 ACO1P21399 889 aaKnown RBP31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 USP8P40818 1118 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 KCNMA1Q12791 1236 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 UBR7Q8N806 425 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 LEMD2Q8NC56 503 aa31.18■■■□□ 2.58
CHCHD4-202ENST00000396914 SLC38A8A6NNN8 435 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 FAM200BP0CF97 657 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 CACNA2D1P54289 1103 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 MTMR3Q13615 1198 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 SLC5A9Q2M3M2 681 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 PPP1R26Q5T8A7 1209 aaPredicted RBP31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 PAQR9Q6ZVX9 377 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 RBBP8NLQ8NC74 664 aaPredicted RBP31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 HNRNPABQ99729 332 aaKnown RBP31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 SIX2Q9NPC8 291 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 DMAP1Q9NPF5 467 aaPredicted RBP31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.17■■■□□ 2.582e-6■■■□□ 14.6
CHCHD4-202ENST00000396914 DNAJC12Q9UKB3 198 aa31.17■■■□□ 2.58
CHCHD4-202ENST00000396914 DOCK6Q96HP0 2047 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 C2CD4DB7Z1M9 353 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 SERPINC1P01008 464 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 FILIP1LQ4L180 1135 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 SGO2Q562F6 1265 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 TCEAL4Q96EI5 215 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 C8orf48Q96LL4 319 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 KCNK16Q96T55 309 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 ZNF334Q9HCZ1 680 aaPredicted RBP31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 USTQ9Y2C2 406 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 DENND4AQ7Z401 1863 aa31.16■■■□□ 2.58
CHCHD4-202ENST00000396914 LRRC10BA6NIK2 292 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 GJA1P17302 382 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 MAP3K7CLP57077 242 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 IFRD2Q12894 506 aaPredicted RBP31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 RAPGEF1Q13905 1077 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 JAKMIP2Q96AA8 810 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 SPATA17Q96L03 361 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 GCNAQ96QF7 691 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 MYADMQ96S97 322 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 PTPRDP23468 1912 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 A0A1W2PRU2 124 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 FGF19O95750 216 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 GABRR2P28476 465 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 TMC8Q8IU68 726 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 ATXN3LQ9H3M9 355 aa31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 AVENQ9NQS1 362 aaPredicted RBP31.15■■■□□ 2.58
CHCHD4-202ENST00000396914 LOC730098B7Z3J9 87 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 RNF225M0QZC1 329 aaPredicted RBP31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 PAEPP09466 180 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 VDRP11473 427 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 CEBPBP17676 345 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 CCR2P41597 374 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 KLK7P49862 253 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 EPHA5P54756 1037 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 SYCP1Q15431 976 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 PRSS36Q5K4E3 855 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 KLHDC7AQ5VTJ3 777 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 DENND5BQ6ZUT9 1274 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 GJD3Q8N144 294 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 PLCD3Q8N3E9 789 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 FGF13Q92913 245 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 SLITRK6Q9H5Y7 841 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 TMEM30AQ9NV96 361 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 CDH7Q9ULB5 785 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 KIAA1257Q9ULG3 409 aa31.14■■■□□ 2.58
CHCHD4-202ENST00000396914 APTXQ7Z2E3 356 aaKnown RBP31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 MCRS1Q96EZ8 462 aa31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 SMOQ99835 787 aa31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 LRRC3Q9BY71 257 aa31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 FAM207AQ9NSI2 230 aaPredicted RBP31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 UXTQ9UBK9 157 aaPredicted RBP31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 HESX1Q9UBX0 185 aa31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 AJAP1Q9UKB5 411 aaPredicted RBP31.13■■■□□ 2.57
CHCHD4-202ENST00000396914 NOL4O94818 638 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 HMGA1P17096 107 aaKnown RBP31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 SLC8A3P57103 927 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 GOLGA7BQ2TAP0 167 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 CEP295NLQ96MC4 621 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 EHD2Q9NZN4 543 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 LIMD1Q9UGP4 676 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 FHOD1Q9Y613 1164 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 MYH10P35580 1976 aa31.12■■■□□ 2.57
CHCHD4-202ENST00000396914 BEST1O76090 585 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms