RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 WEE1P30291 646 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 NRLP54845 237 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 TPM4P67936 248 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 TFAMQ00059 246 aaKnown RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 EHHADHQ08426 723 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 SIM2Q14190 667 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 VEPH1Q14D04 833 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 DDR2Q16832 855 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 ARHGAP15Q53QZ3 475 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 FSTL4Q6MZW2 842 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 SMYD4Q8IYR2 804 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 THEM5Q8N1Q8 247 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 PDCL2Q8N4E4 241 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 CELF5Q8N6W0 485 aaKnown RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 RNF214Q8ND24 703 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 DHTKD1Q96HY7 919 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 SLC22A12Q96S37 553 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 PKMYT1Q99640 499 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 IER2Q9BTL4 223 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 EBF3Q9H4W6 596 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 PCIF1Q9H4Z3 704 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 SLC39A2Q9NP94 309 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 OLFML3Q9NRN5 406 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 OBP2AQ9NY56 170 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 SIX4Q9UIU6 781 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 DSEQ9UL01 958 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 MAGED2Q9UNF1 606 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-202ENST00000396828 AGAP1Q9UPQ3 857 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 PTPRJQ12913 1337 aa11.08□□□□□ -0.64
NEDD8-202ENST00000396828 EML5Q05BV3 1969 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 BICDL2A1A5D9 508 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ANTXRLA6NF34 631 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 GDF9O60383 454 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 IL18RAPO95256 599 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 GCNT3O95395 438 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 FGF19O95750 216 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PAX3P23760 479 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 CDC25CP30307 473 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ABCD1P33897 745 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PRCPP42785 496 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 STK4Q13043 487 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PAK1Q13153 545 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ALCAMQ13740 583 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 LRRC32Q14392 662 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ITPRIPL2Q3MIP1 535 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 SV2CQ496J9 727 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 DGKKQ5KSL6 1271 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 LMBRD2Q68DH5 695 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 BRSK2Q8IWQ3 736 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 GUF1Q8N442 669 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 SPPL2BQ8TCT7 592 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 C2orf15Q8WU43 125 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 EZH1Q92800 747 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 MSANTD3Q96H12 275 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 CYP2S1Q96SQ9 504 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 RBSNQ9H1K0 784 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 CBX8Q9HC52 389 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PDE11AQ9HCR9 933 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 GMEB2Q9UKD1 530 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 MAPK8IP1Q9UQF2 711 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 PCDHB5Q9Y5E4 795 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 TPRP12270 2363 aaKnown RBP11.07□□□□□ -0.64
NEDD8-202ENST00000396828 RALGAPA1Q6GYQ0 2036 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ACACBO00763 2458 aa11.07□□□□□ -0.64
NEDD8-202ENST00000396828 ANAPC1Q9H1A4 1944 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 IKBKBO14920 756 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 ATP2C2O75185 946 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 EGFP01133 1207 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 RETP07949 1114 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
NEDD8-202ENST00000396828 LMO2P25791 158 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 HOXD13P35453 343 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 POU5F1Q01860 360 aaKnown RBP11.06□□□□□ -0.64
NEDD8-202ENST00000396828 MYL5Q02045 173 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 LMNB2Q03252 620 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 RUNX3Q13761 415 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 PPP2R5DQ14738 602 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 CCDC6Q16204 474 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 TAF12Q16514 161 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 TPD52L1Q16890 204 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-202ENST00000396828 TMEM196Q5HYL7 178 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 KLHL10Q6JEL2 608 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 DCP1BQ8IZD4 617 aaKnown RBP11.06□□□□□ -0.64
NEDD8-202ENST00000396828 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-202ENST00000396828 CSGALNACT2Q8N6G5 542 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 AOPEPQ8N6M6 819 aa11.06□□□□□ -0.64
NEDD8-202ENST00000396828 KIAA0895Q8NCT3 520 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms