RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PPIL6Q8IXY8 311 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 CEP120Q8N960 986 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 CPT1BQ92523 772 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 NSL1Q96IY1 281 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 CLMNQ96JQ2 1002 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TRIM55Q9BYV6 548 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ARL8BQ9NVJ2 186 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 POLIQ9UNA4 740 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PCDHB4Q9Y5E5 795 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 C3orf70A6NLC5 250 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 FAM155BO75949 473 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PEX19P40855 299 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 SSR1P43307 286 aaKnown RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ARL4CP56559 192 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 CDK16Q00536 496 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 CBLBQ13191 982 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TFDP1Q14186 410 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ACSBG2Q5FVE4 666 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TREML2Q5T2D2 321 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TMEM270Q6UE05 265 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 SH2D5Q6ZV89 423 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 XPNPEP1Q9NQW7 623 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 PTPRJQ12913 1337 aa13.97□□□□□ -0.17
TRIM40-207ENST00000396581 ARID2Q68CP9 1835 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF862O60290 1169 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 DGAT1O75907 488 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 CALB1P05937 261 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 DLDP09622 509 aaKnown RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 NEFHP12036 1026 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 SSTR1P30872 391 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 NEK3P51956 506 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 OGDHQ02218 1023 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 TAP1Q03518 808 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PIGHQ14442 188 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PRKD1Q15139 912 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 MUM1Q2TAK8 710 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 OR52E8Q6IFG1 317 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 CAPN12Q6ZSI9 719 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 MOB2Q70IA6 237 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 POLNQ7Z5Q5 900 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PYROXD1Q8WU10 500 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 NRG4Q8WWG1 115 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF606Q8WXB4 792 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PTPRN2Q92932 1015 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 CNTN3Q9P232 1028 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 SLC17A7Q9P2U7 560 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 STX18Q9P2W9 335 aaKnown RBP13.96□□□□□ -0.17
TRIM40-207ENST00000396581 HEY2Q9UBP5 337 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PCDHA10Q9Y5I2 948 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 PTPRFP10586 1907 aa13.96□□□□□ -0.17
TRIM40-207ENST00000396581 OTOFQ9HC10 1997 aa13.96□□□□□ -0.18
TRIM40-207ENST00000396581 ENO4A6NNW6 628 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 F8VP50 259 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 KLF11O14901 512 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 BANF1O75531 89 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 LSM8O95777 96 aaKnown RBP13.95□□□□□ -0.18
TRIM40-207ENST00000396581 PIGRP01833 764 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TNNI1P19237 187 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TAZQ16635 292 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TXNRD3NBQ6F5E7 133 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SMYD5Q6GMV2 418 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 C3orf62Q6ZUJ4 267 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 ANKMY2Q8IV38 441 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 CEP170P1Q96L14 293 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 TSSK1BQ9BXA7 367 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SYNCQ9H7C4 482 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SGK1O00141 431 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 PSMG1O95456 288 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 PDHA1P08559 390 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 EIF2AK2P19525 551 aaKnown RBP13.95□□□□□ -0.18
TRIM40-207ENST00000396581 ARFIP2P53365 341 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 SOX10P56693 466 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 INHBEP58166 350 aa13.95□□□□□ -0.18
TRIM40-207ENST00000396581 NLRP11P59045 1033 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms