RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PON1P27169 355 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 VEPH1Q14D04 833 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 KRT31Q15323 416 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 TAF12Q16514 161 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 VSTM1Q6UX27 236 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 FAM35AQ86V20 835 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 ZDHHC14Q8IZN3 488 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 SLC2A14Q8TDB8 520 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.41
CXCL1-201ENST00000395761 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
CXCL1-201ENST00000395761 KREMEN1Q96MU8 473 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.59■□□□□ 0.41
CXCL1-201ENST00000395761 CDH7Q9ULB5 785 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 GTPBP10A4D1E9 387 aaKnown RBP17.58■□□□□ 0.4
CXCL1-201ENST00000395761 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 F8VP50 259 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 LAMP2P13473 410 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 ZNF18P17022 549 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 ADORA2BP29275 332 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 GCNT1Q02742 428 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 GJB7Q6PEY0 223 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 GAREM2Q75VX8 874 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 NPAS3Q8IXF0 933 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 TTC39CQ8N584 583 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 LEMD2Q8NC56 503 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 SHKBP1Q8TBC3 707 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 CYFIP2Q96F07 1278 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 TMEM176AQ96HP8 235 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 C8orf48Q96LL4 319 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 KCNK16Q96T55 309 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 VPS16Q9H269 839 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 IL21Q9HBE4 155 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 UBE2TQ9NPD8 197 aaPredicted RBP17.58■□□□□ 0.4
CXCL1-201ENST00000395761 EPS15L1Q9UBC2 864 aa17.58■□□□□ 0.4
CXCL1-201ENST00000395761 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
CXCL1-201ENST00000395761 A0A1W2PRU2 124 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 BECN2A8MW95 431 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 RNF225M0QZC1 329 aaPredicted RBP17.57■□□□□ 0.4
CXCL1-201ENST00000395761 PES1O00541 588 aaKnown RBP17.57■□□□□ 0.4
CXCL1-201ENST00000395761 DLL1O00548 723 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 ZNF197O14709 1029 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 BEST1O76090 585 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 NOL4O94818 638 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 ASGR2P07307 311 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 GABRR2P28476 465 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 YWHAEP62258 255 aaKnown RBP17.57■□□□□ 0.4
CXCL1-201ENST00000395761 KCNMA1Q12791 1236 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 TEAD2Q15562 447 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 DPY19L2P1Q6NXN4 242 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 LUZP1Q86V48 1076 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 PLCD3Q8N3E9 789 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 SPATA17Q96L03 361 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 ZSWIM3Q96MP5 696 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 HNRNPABQ99729 332 aaKnown RBP17.57■□□□□ 0.4
CXCL1-201ENST00000395761 SMOQ99835 787 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 FAM124BQ9H5Z6 455 aaPredicted RBP17.57■□□□□ 0.4
CXCL1-201ENST00000395761 SIX2Q9NPC8 291 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 KRT82Q9NSB4 513 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
CXCL1-201ENST00000395761 ATP8B3O60423 1300 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 TNFRSF10AO00220 468 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 TRIM66O15016 1216 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 AP1G2O75843 785 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 MICAL2O94851 1124 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 CALCAP01258 141 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 CSH1P0DML2 217 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 CSH2P0DML3 217 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 ATP1A3P13637 1013 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
CXCL1-201ENST00000395761 ANXA13P27216 316 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 USP46P62068 366 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 PPP1R26Q5T8A7 1209 aaPredicted RBP17.56■□□□□ 0.4
CXCL1-201ENST00000395761 TMEM270Q6UE05 265 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 TMEM150AQ86TG1 271 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 ZMIZ2Q8NF64 920 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 RSAD2Q8WXG1 361 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 SMARCD1Q96GM5 515 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 RBSNQ9H1K0 784 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 ATXN3LQ9H3M9 355 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 LIMA1Q9UHB6 759 aaKnown RBP17.56■□□□□ 0.4
CXCL1-201ENST00000395761 MUTYHQ9UIF7 546 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 PTPRDP23468 1912 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 NCOR1O75376 2440 aa17.56■□□□□ 0.4
CXCL1-201ENST00000395761 COPB1P53618 953 aaKnown RBP17.55■□□□□ 0.4
CXCL1-201ENST00000395761 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
CXCL1-201ENST00000395761 DENND5BQ6ZUT9 1274 aa17.55■□□□□ 0.4
CXCL1-201ENST00000395761 APTXQ7Z2E3 356 aaKnown RBP17.55■□□□□ 0.4
CXCL1-201ENST00000395761 MYRFLQ96LU7 910 aa17.55■□□□□ 0.4
CXCL1-201ENST00000395761 KCNK12Q9HB15 430 aa17.55■□□□□ 0.4
CXCL1-201ENST00000395761 APEX2Q9UBZ4 518 aa17.55■□□□□ 0.4
CXCL1-201ENST00000395761 AJAP1Q9UKB5 411 aaPredicted RBP17.55■□□□□ 0.4
CXCL1-201ENST00000395761 ZFP37Q9Y6Q3 630 aaPredicted RBP17.55■□□□□ 0.4
CXCL1-201ENST00000395761 DOCK8Q8NF50 2099 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
CXCL1-201ENST00000395761 F11P03951 625 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms