RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SH2D4AQ9H788 454 aa6.33□□□□□ -1.4
AP3S1-202ENST00000395548 IGSF9Q9P2J2 1179 aa6.33□□□□□ -1.4
AP3S1-202ENST00000395548 FBXO40Q9UH90 709 aa6.33□□□□□ -1.4
AP3S1-202ENST00000395548 MYRFQ9Y2G1 1151 aa6.33□□□□□ -1.4
AP3S1-202ENST00000395548 AKAP13Q12802 2813 aa6.33□□□□□ -1.4
AP3S1-202ENST00000395548 ELL2O00472 640 aaPredicted RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 VWA5AO00534 786 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 PER2O15055 1255 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 LTFP02788 710 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 ITGB1P05556 798 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 CCR10P46092 362 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 NOVA1P51513 510 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 EXOSC10Q01780 885 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 UBE3AQ05086 875 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 HDAC1Q13547 482 aaPredicted RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 BTG3Q14201 252 aaPredicted RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 LRRC24Q50LG9 513 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 SNRNP48Q6IEG0 339 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 PKN3Q6P5Z2 889 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 SLC4A10Q6U841 1118 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 GGNQ86UU5 652 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
AP3S1-202ENST00000395548 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 DNAAF4Q8WXU2 420 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 NELL1Q92832 810 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 CASP10Q92851 521 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 MBD6Q96DN6 1003 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 MYL10Q9BUA6 226 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 APOL5Q9BWW9 433 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 TMEM260Q9NX78 707 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 ZDHHC9Q9Y397 364 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
AP3S1-202ENST00000395548 COL12A1Q99715 3063 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PDS5AQ29RF7 1337 aaKnown RBP6.31□□□□□ -1.4
AP3S1-202ENST00000395548 MYH13Q9UKX3 1938 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
AP3S1-202ENST00000395548 NPEPPSL1A6NEC2 478 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 CAND2O75155 1236 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PRB1P04280 392 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 APPP05067 770 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 LINC00271P0C7V0 271 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 HSPA5P11021 654 aaKnown RBP6.31□□□□□ -1.4
AP3S1-202ENST00000395548 INSRRP14616 1297 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 DNAJB1P25685 340 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PPP2CBP62714 309 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PPP2CAP67775 309 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 ADAM17P78536 824 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 PFKPQ01813 784 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 TROAPQ12815 778 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 DUSP28Q4G0W2 176 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 ATAT1Q5SQI0 421 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 STPG1Q5TH74 334 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 CPZQ66K79 652 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 FAM133AQ8N9E0 248 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 VN1R2Q8NFZ6 395 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 APBB2Q92870 758 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 LRIG1Q96JA1 1093 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 MAF1Q9H063 256 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 SERPINB13Q9UIV8 391 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 CA14Q9ULX7 337 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 ATG2AQ2TAZ0 1938 aa6.31□□□□□ -1.4
AP3S1-202ENST00000395548 GRM8O00222 908 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 WNT9AO14904 365 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 GSTA4O15217 222 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 C1QL1O75973 258 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 GABREP78334 506 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 GUCY1A3Q02108 690 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 KCNC3Q14003 757 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 GPR19Q15760 415 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 CCDC6Q16204 474 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 LPAL2Q16609 132 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ZC3H12BQ5HYM0 836 aaKnown RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 FAM209AQ5JX71 171 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 CD276Q5ZPR3 534 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 C11orf96Q7Z7L8 435 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 MAPKAPK5Q8IW41 473 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 IGDCC4Q8TDY8 1250 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 SH3RF3Q8TEJ3 882 aaPredicted RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 FBXW5Q969U6 566 aa6.3□□□□□ -1.4
AP3S1-202ENST00000395548 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
AP3S1-202ENST00000395548 VTA1Q9NP79 307 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms