RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 WNT7BP56706 349 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 GTF2BQ00403 316 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 RING1Q06587 406 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 NFE2Q16621 373 aaPredicted RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 SCARA3Q6AZY7 606 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 ADALQ6DHV7 355 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 OLIG1Q8TAK6 271 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 SH3RF2Q8TEC5 729 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 EVLQ9UI08 416 aaPredicted RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 MMP17Q9ULZ9 603 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 ITPR1Q14643 2758 aa17.02■□□□□ 0.31
SNCA-205ENST00000394991 ADAMTS20P59510 1910 aa17.02■□□□□ 0.31
SNCA-205ENST00000394991 HCRTO43612 131 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 TCF3P15923 654 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
SNCA-205ENST00000394991 ZXDBP98169 803 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 CRY1Q16526 586 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 TRIM61Q5EBN2 209 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 INTS6LQ5JSJ4 861 aaKnown RBP17.01■□□□□ 0.31
SNCA-205ENST00000394991 TMEM92Q6UXU6 159 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 OSTM1Q86WC4 334 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 SFTPA1Q8IWL2 248 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 RLN3Q8WXF3 142 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 DDX43Q9NXZ2 648 aaKnown RBP17.01■□□□□ 0.31
SNCA-205ENST00000394991 KLK13Q9UKR3 277 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
SNCA-205ENST00000394991 LHX6Q9UPM6 363 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 NEUROG3Q9Y4Z2 214 aa17.01■□□□□ 0.31
SNCA-205ENST00000394991 POLR2BP30876 1174 aaKnown RBP17■□□□□ 0.31
SNCA-205ENST00000394991 P2RY2P41231 377 aa17■□□□□ 0.31
SNCA-205ENST00000394991 MESP2Q0VG99 397 aa17■□□□□ 0.31
SNCA-205ENST00000394991 NR1H3Q13133 447 aa17■□□□□ 0.31
SNCA-205ENST00000394991 MCM6Q14566 821 aa17■□□□□ 0.31
SNCA-205ENST00000394991 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
SNCA-205ENST00000394991 ARMCX6Q7L4S7 300 aa17■□□□□ 0.31
SNCA-205ENST00000394991 TTC30AQ86WT1 665 aa17■□□□□ 0.31
SNCA-205ENST00000394991 FRMD1Q8N878 549 aa17■□□□□ 0.31
SNCA-205ENST00000394991 NBEAQ8NFP9 2946 aa17■□□□□ 0.31
SNCA-205ENST00000394991 FAM84AQ96KN4 292 aa17■□□□□ 0.31
SNCA-205ENST00000394991 FNBP1Q96RU3 617 aa17■□□□□ 0.31
SNCA-205ENST00000394991 ACBD6Q9BR61 282 aa17■□□□□ 0.31
SNCA-205ENST00000394991 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
SNCA-205ENST00000394991 TMEM74BQ9NUR3 256 aa17■□□□□ 0.31
SNCA-205ENST00000394991 GTF3C4Q9UKN8 822 aa17■□□□□ 0.31
SNCA-205ENST00000394991 ARHGAP26Q9UNA1 814 aa17■□□□□ 0.31
SNCA-205ENST00000394991 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
SNCA-205ENST00000394991 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 SPAARA0A1B0GVQ0 90 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 SEC24BO95487 1268 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 NFATC1O95644 943 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 ENGP17813 658 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 PTGER3P43115 390 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 MAPK8P45983 427 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 RILPL1Q5EBL4 403 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 PIP4P1Q86T03 277 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 TMEFF1Q8IYR6 380 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 C1orf127Q8N9H9 656 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 CCDC26Q8TAB7 109 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 MBD1Q9UIS9 605 aaPredicted RBP16.99■□□□□ 0.31
SNCA-205ENST00000394991 MSRB2Q9Y3D2 182 aa16.99■□□□□ 0.31
SNCA-205ENST00000394991 TNFRSF10BO14763 440 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 CYP17A1P05093 508 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ITGB3P05106 788 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 HDCP19113 662 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ADSSP30520 456 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 PNPLA4P41247 253 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 POU5F1Q01860 360 aaKnown RBP16.98■□□□□ 0.31
SNCA-205ENST00000394991 LMAN2Q12907 356 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 KCNB1Q14721 858 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 CFAP221Q4G0U5 840 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ARL6IP4Q66PJ3 421 aaKnown RBP16.98■□□□□ 0.31
SNCA-205ENST00000394991 SLFN12LQ6IEE8 588 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 SCN4BQ8IWT1 228 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ALLCQ8N6M5 410 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ZSWIM2Q8NEG5 633 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 CXorf38Q8TB03 319 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 ZSCAN31Q96LW9 406 aaPredicted RBP16.98■□□□□ 0.31
SNCA-205ENST00000394991 AGAP1Q9UPQ3 857 aa16.98■□□□□ 0.31
SNCA-205ENST00000394991 SGK1O00141 431 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 LEFTY2O00292 366 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 IL18RAPO95256 599 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 KLF8O95600 359 aaPredicted RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 PLCG1P19174 1290 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 MRPS21P82921 87 aaKnown RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 MYL7Q01449 175 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 SEMA3BQ13214 749 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 LPCAT2Q7L5N7 544 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 NT5DC4Q86YG4 428 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 IL17RCQ8NAC3 791 aa16.97■□□□□ 0.31
SNCA-205ENST00000394991 TXNDC5Q8NBS9 432 aaKnown RBP16.97■□□□□ 0.31
SNCA-205ENST00000394991 POMGNT1Q8WZA1 660 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms