RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 DTX3LQ8TDB6 740 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 CPB2Q96IY4 423 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SMYD3Q9H7B4 428 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 PIH1D1Q9NWS0 290 aaKnown RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 C2orf71A6NGG8 1288 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TP73O15350 636 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 MIPP30301 263 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TCEAL1Q15170 157 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 AMHR2Q16671 573 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 LRRC6Q86X45 466 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 NETO2Q8NC67 525 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 ZNF75CPQ92670 426 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 CPXM1Q96SM3 734 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TRIM55Q9BYV6 548 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SLC17A7Q9P2U7 560 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 UPP2O95045 317 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 ARFIP2P53365 341 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 BNIP1Q12981 228 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SH3PXD2AQ5TCZ1 1133 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 APBB1IPQ7Z5R6 666 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-203ENST00000394419 WDR49Q8IV35 697 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 SULF1Q8IWU6 871 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 STMN2Q93045 179 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 PCDH9Q9HC56 1237 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 HEY2Q9UBP5 337 aa11.04□□□□□ -0.64
ACTN1-203ENST00000394419 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 I3L4J1 428 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 COPEO14579 308 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 PYGBP11216 843 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KLRC2P26717 231 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 IL1R2P27930 398 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 CDKN2BP42772 138 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 BCAR1P56945 870 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 TMPRSS15P98073 1019 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KCTD2Q14681 263 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 CATSPERGQ6ZRH7 1159 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 PCGF5Q86SE9 256 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 FAM149B1Q96BN6 582 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 TSSK1BQ9BXA7 367 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 USP18Q9UMW8 372 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 GYG2O15488 501 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 LRCH4O75427 683 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 TXNP10599 105 aaKnown RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 ESRRAP11474 423 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KDELR1P24390 212 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 MCL1Q07820 350 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KLHL38Q2WGJ6 581 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 TREML2Q5T2D2 321 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 C15orf39Q6ZRI6 1047 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 CYTH2Q99418 400 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 YY1AP1Q9H869 796 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 ELP3Q9H9T3 547 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 ASNSD1Q9NWL6 643 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 FAM155BO75949 473 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 UNC5CO95185 931 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 VTNP04004 478 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 NFICP08651 508 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 BGNP21810 368 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 RFC5P40937 340 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KBTBD12Q3ZCT8 623 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 IER5Q5VY09 327 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 RIBC1Q8N443 379 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 FAM49AQ9H0Q0 323 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 CCDC134Q9H6E4 229 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 MANSC1Q9H8J5 431 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 ARMCX1Q9P291 453 aa11.03□□□□□ -0.64
ACTN1-203ENST00000394419 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
ACTN1-203ENST00000394419 KBTBD13C9JR72 458 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 HAUS5O94927 633 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 STBD1O95210 358 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 P4HA1P13674 534 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 CCND1P24385 295 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ARL2P36404 184 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 RTP1P59025 263 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF252P-AS1Q0IIN9 211 aa11.02□□□□□ -0.65
ACTN1-203ENST00000394419 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms