RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 PPP1R2P3Q6NXS1 205 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
TUBD1-205ENST00000394239 CPA5Q8WXQ8 436 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 SNX27Q96L92 541 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 PAAF1Q9BRP4 392 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 MTMR12Q9C0I1 747 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
TUBD1-205ENST00000394239 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
TUBD1-205ENST00000394239 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 THAP12O43422 761 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 RWDD2BP57060 319 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 TRPC3Q13507 836 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 DHX34Q14147 1143 aaKnown RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 CYFIP2Q96F07 1278 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 SH3GL2Q99962 352 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
TUBD1-205ENST00000394239 CNTN6Q9UQ52 1028 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
TUBD1-205ENST00000394239 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 FAM187AA6NFU0 413 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 DAPK3O43293 454 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 PHF2O75151 1096 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 PYGMP11217 842 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 RRM1P23921 792 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 CHRNA3P32297 505 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 HSPA9P38646 679 aaKnown RBP13.03□□□□□ -0.32
TUBD1-205ENST00000394239 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
TUBD1-205ENST00000394239 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-205ENST00000394239 SGSM1Q2NKQ1 1148 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 AADACL2Q6P093 401 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 SEC14L1Q92503 715 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-205ENST00000394239 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 GOLGA2P5Q9HBQ8 144 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
TUBD1-205ENST00000394239 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ERICH4A6NGS2 130 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 LACTBL1A8MY62 500 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 MYO1FO00160 1098 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 LPXNO60711 386 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 TNNC2P02585 160 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ECHS1P30084 290 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 CTNNB1P35222 781 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 BMPR1AP36894 532 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 SLC1A1P43005 524 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 SLC11A1P49279 550 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ZNF132P52740 706 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 BCAR1P56945 870 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 MYL6P60660 151 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 NOMO3P69849 1222 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 DSC1Q08554 894 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ADGRE1Q14246 886 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 SPOUT1Q5T280 376 aaKnown RBP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 DEFB123Q8N688 67 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 FAM76AQ8TAV0 307 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 URGCPQ8TCY9 931 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ANKRD36BP1Q96IX9 119 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ZIM3Q96PE6 472 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 C11orf70Q9BRQ4 267 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 MRPL47Q9HD33 250 aaKnown RBP13.02□□□□□ -0.32
TUBD1-205ENST00000394239 ADAM22Q9P0K1 906 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 CNTN3Q9P232 1028 aa13.02□□□□□ -0.32
TUBD1-205ENST00000394239 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-205ENST00000394239 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.33
TUBD1-205ENST00000394239 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
TUBD1-205ENST00000394239 GALTP07902 379 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms