RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 RBM12BQ8IXT5 1001 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 MCOLN2Q8IZK6 566 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 SH3TC2Q8TF17 1288 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 DDX27Q96GQ7 796 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 NLRP4Q96MN2 994 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ZNF184Q99676 751 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 TMEM109Q9BVC6 243 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ROPN1BQ9BZX4 212 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 MTMR12Q9C0I1 747 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ST6GALNAC4Q9H4F1 302 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 C10orf88Q9H8K7 445 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 ROPN1Q9HAT0 212 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 FBXO6Q9NRD1 293 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 PCDHA3Q9Y5H8 950 aa10.45□□□□□ -0.74
PSEN1-204ENST00000394164 TNS1Q9HBL0 1735 aaKnown RBP10.45□□□□□ -0.74
PSEN1-204ENST00000394164 FAM47DPA6NHR8 397 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 EXTL3O43909 919 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 GGPS1O95749 300 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 KRT19P08727 400 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 KRT15P19012 456 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 SERPINB3P29508 390 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 RPA3P35244 121 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ADCY8P40145 1251 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ITGA8P53708 1063 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TAS2R40P59535 323 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ZBTB16Q05516 673 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 VGLL4Q14135 290 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ZRSR2Q15696 482 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 GJC2Q5T442 439 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 RINLQ6ZS11 566 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ANKS1BQ7Z6G8 1248 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 USP37Q86T82 979 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 RFWD2Q8NHY2 731 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 COPS5Q92905 334 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CD101Q93033 1021 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CLMNQ96JQ2 1002 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 SMC6Q96SB8 1091 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 NTPCRQ9BSD7 190 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ELP3Q9H9T3 547 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 NINJ2Q9NZG7 142 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 PDP2Q9P2J9 529 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ARHGAP28Q9P2N2 729 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TTC7AQ9ULT0 858 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 AFG3L2Q9Y4W6 797 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 POLR2AP24928 1970 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 PIK3R2O00459 728 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 MAGEB3O15480 346 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ABCD1P33897 745 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TCF7P36402 384 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 LIN52Q52LA3 116 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CYP4A22Q5TCH4 519 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TRMT10CQ7L0Y3 403 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 PSPC1Q8WXF1 523 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CLPTM1LQ96KA5 538 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 DDX18Q9NVP1 670 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 HOXC10Q9NYD6 342 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 ARMCX1Q9P291 453 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 GOLGA8SH3BPF8 625 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 DDNO94850 711 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TTC4O95801 387 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 LMNAP02545 664 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 FGFR1P11362 822 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CA4P22748 312 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CETN2P41208 172 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 MAGEA8P43361 318 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 STAT5BP51692 787 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 DRG2P55039 364 aaKnown RBP10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TGFB2P61812 414 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 MOGSQ13724 837 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 CAPSQ13938 189 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 PLEKHG4Q58EX7 1191 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 PPP1R21Q6ZMI0 780 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 OTOAQ7RTW8 1153 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 RHPN2Q8IUC4 686 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 RNF149Q8NC42 400 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 C10orf82Q8WW14 230 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 YIPF2Q9BWQ6 316 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 COQ4Q9Y3A0 265 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 MYPNQ86TC9 1320 aa10.44□□□□□ -0.74
PSEN1-204ENST00000394164 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
PSEN1-204ENST00000394164 GSC2O15499 205 aa10.43□□□□□ -0.74
PSEN1-204ENST00000394164 SUPT3HO75486 399 aa10.43□□□□□ -0.74
PSEN1-204ENST00000394164 C4BPAP04003 597 aaKnown RBP10.43□□□□□ -0.74
PSEN1-204ENST00000394164 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
PSEN1-204ENST00000394164 ZSCAN5DPP0CG00 497 aa10.43□□□□□ -0.74
PSEN1-204ENST00000394164 DESP17661 470 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms