RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 HALP42357 657 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PHKA2P46019 1235 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 LACTBP83111 547 aaPredicted RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 SEPT7Q16181 437 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 TAF3Q5VWG9 929 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TDRD10Q5VZ19 366 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 ZPBP2Q6X784 338 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 USP37Q86T82 979 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 KIAA0319LQ8IZA0 1049 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CAPNS2Q96L46 248 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MAP7D2Q96T17 732 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PSMB7Q99436 277 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CDC6Q99741 560 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CARD6Q9BX69 1037 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 C2orf40Q9H1Z8 148 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 RAB20Q9NX57 234 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 FBXL5Q9UKA1 691 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ANK1P16157 1881 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 MAGEB2O15479 319 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CYP26A1O43174 497 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 SIAH2O43255 324 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 SRGAP2O75044 1071 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 LCA5LO95447 670 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 HLA-DRAP01903 254 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 ATP1A1P05023 1023 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 KRT5P13647 590 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 PIK3CAP42336 1068 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CASP2P42575 452 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TMPRSS15P98073 1019 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TFAMQ00059 246 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 DMTNQ08495 405 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 KRT72Q14CN4 511 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 PSMD6Q15008 389 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 FSCN1Q16658 493 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 TJAP1Q5JTD0 557 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 NFRKBQ6P4R8 1299 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 ALKBH5Q6P6C2 394 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 Q6ZVU0 165 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 COG1Q8WTW3 980 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 ATXN2LQ8WWM7 1075 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 NT5C1BQ96P26 610 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 OSMRQ99650 979 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 NAPGQ99747 312 aaPredicted RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 GRIP2Q9C0E4 1043 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 MTMR12Q9C0I1 747 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 FZD8Q9H461 694 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 L2HGDHQ9H9P8 463 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 KIAA1586Q9HCI6 787 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 NAGPAQ9UK23 515 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CITO14578 2027 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 A0A1W2PQU0 124 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 GPR25O00155 361 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
CASC3-202ENST00000394114 ABLIM1O14639 778 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 OGTO15294 1046 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 P4HA2O15460 535 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 FAM189A1O60320 539 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 SLU7O95391 586 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 SGPL1O95470 568 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 VNN1O95497 513 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TUBB4AP04350 444 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CXCL8P10145 99 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CYP2C9P11712 490 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 HOXD8P13378 290 aaPredicted RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 ABCB4P21439 1286 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 PRKCIP41743 596 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 SSR1P43307 286 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 RPL6Q02878 288 aaKnown RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 NOGQ13253 232 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 DEFB115Q30KQ5 88 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TRIM61Q5EBN2 209 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 MPZL3Q6UWV2 235 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CXCL17Q6UXB2 119 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 SLC47A2Q86VL8 602 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 LINC01465Q8N7H1 131 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 LNX1Q8TBB1 728 aaPredicted RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 TMEM40Q8WWA1 233 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 GAL3ST3Q96A11 431 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CDT1Q9H211 546 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 GOLPH3Q9H4A6 298 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 ZNF576Q9H609 170 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 IL21Q9HBE4 155 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 TRIM39Q9HCM9 518 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CHORDC1Q9UHD1 332 aaPredicted RBP6.26□□□□□ -1.41
CASC3-202ENST00000394114 MYO6Q9UM54 1294 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 IPPQ9Y573 584 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 UMODL1Q5DID0 1318 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CNTNAP2Q9UHC6 1331 aa6.26□□□□□ -1.41
CASC3-202ENST00000394114 CDH23Q9H251 3354 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 PRRT4C9JH25 899 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ASAP2O43150 1006 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 NCK2O43639 380 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ERLIN2O94905 339 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 C4BPAP04003 597 aaKnown RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 ACRP10323 421 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TYRP1P17643 537 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms