RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SNRPFP62306 86 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 STK4Q13043 487 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 LRRC32Q14392 662 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 DGKKQ5KSL6 1271 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 ATL3Q6DD88 541 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 SCN4BQ8IWT1 228 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 KIAA0895Q8NCT3 520 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 PCED1BQ96HM7 432 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 XYLT2Q9H1B5 865 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 TMEM30AQ9NV96 361 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 THG1LQ9NWX6 298 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 GCNT4Q9P109 453 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 ZDHHC9Q9Y397 364 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 HELZP42694 1942 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 PAPSS2O95340 614 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 TGM1P22735 817 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 BDNFP23560 247 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 CASP4P49662 377 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 USP46P62068 366 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 RUNX3Q13761 415 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 ZNF268Q14587 947 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 KNOP1Q1ED39 458 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 NAIF1Q69YI7 327 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 PKN3Q6P5Z2 889 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 PAGE5Q96GU1 130 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 FNBP1Q96RU3 617 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 MMS19Q96T76 1030 aa19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 FBRSL1Q9HCM7 1045 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 MAGEC2Q9UBF1 373 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 UXTQ9UBK9 157 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 R3HCC1Q9Y3T6 440 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-205ENST00000393551 C2orf78A6NCI8 922 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 TACC1O75410 805 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 SLFN14P0C7P3 912 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 CACNA2D1P54289 1103 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 ZXDBP98169 803 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 ZNF77Q15935 545 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 TMEM196Q5HYL7 178 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 FSTL4Q6MZW2 842 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 C4orf50Q6ZRC1 276 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 HS2ST1Q7LGA3 356 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 MYCBPAPQ8TBZ2 947 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 SPATA17Q96L03 361 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 DPEP3Q9H4B8 488 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 KIF9Q9HAQ2 790 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 TRPC7Q9HCX4 862 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 CFAP45Q9UL16 551 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 MYO16Q9Y6X6 1858 aa19.5■□□□□ 0.71
PDLIM7-205ENST00000393551 CHURC1-FNTBB4DL54 471 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 HRO43593 1189 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 GNL1P36915 607 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 FNTBP49356 437 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 NRLP54845 237 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 MYL6P60660 151 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 WDR72Q3MJ13 1102 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 MDH1BQ5I0G3 518 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 VSTM1Q6UX27 236 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 ARL14EPQ8N8R7 260 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 ELMO3Q96BJ8 720 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 DMAC2Q9NW81 257 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 CGNQ9P2M7 1197 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 NCDNQ9UBB6 729 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 SDK1Q7Z5N4 2213 aa19.49■□□□□ 0.71
PDLIM7-205ENST00000393551 A0A1B0GVL5 298 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 TRDMT1O14717 391 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 STAU1O95793 577 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 PFKFB1P16118 471 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 GRIK1P39086 918 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 CLDN10P78369 228 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 CYP27A1Q02318 531 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 USP4Q13107 963 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 SRSF5Q13243 272 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 PPP2R5DQ14738 602 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 MTF1Q14872 753 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 LPAL2Q16609 132 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 KMT5BQ4FZB7 885 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 TDRD10Q5VZ19 366 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 ERMP1Q7Z2K6 904 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 SYNPOQ8N3V7 929 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 PARD3BQ8TEW8 1205 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 PARD6AQ9NPB6 346 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 HPSEQ9Y251 543 aa19.48■□□□□ 0.71
PDLIM7-205ENST00000393551 SPTBN2O15020 2390 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 NCOR2Q9Y618 2525 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 KIAA1549LQ6ZVL6 1849 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 EML5Q05BV3 1969 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 TRAV19A0A0A6YYK7 116 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 LRRIQ3A6PVS8 624 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 EXOC3O60645 756 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 FAM163BP0C2L3 166 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 USP17L7P0C7H9 530 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 PTPN1P18031 435 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 CMA1P23946 247 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 MAPRE1Q15691 268 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 DENND5BQ6ZUT9 1274 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 CEP57L1Q8IYX8 460 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 OR6B3Q8NGW1 331 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms