RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 FAM3CQ92520 227 aa20.37■□□□□ 0.85
CRAT-202ENST00000393384 CNTNAP3BQ96NU0 1288 aa20.37■□□□□ 0.85
CRAT-202ENST00000393384 LRRC3BQ96PB8 259 aa20.37■□□□□ 0.85
CRAT-202ENST00000393384 CNTNAP3Q9BZ76 1288 aa20.37■□□□□ 0.85
CRAT-202ENST00000393384 MAGEC2Q9UBF1 373 aaPredicted RBP20.37■□□□□ 0.85
CRAT-202ENST00000393384 MAGED2Q9UNF1 606 aaPredicted RBP20.37■□□□□ 0.85
CRAT-202ENST00000393384 PIAS3Q9Y6X2 628 aa20.37■□□□□ 0.85
CRAT-202ENST00000393384 HELZP42694 1942 aaKnown RBP20.37■□□□□ 0.85
CRAT-202ENST00000393384 ATP2C2O75185 946 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 NOL4O94818 638 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 TDGF1P13385 188 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 TGM1P22735 817 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 ATICP31939 592 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 MAGEA11P43364 429 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CCR3P51677 355 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 AP3M2P53677 418 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CLDN10P78369 228 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CCDC142Q17RM4 750 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 WDR72Q3MJ13 1102 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 C1orf228Q6PIY5 440 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CMTM8Q8IZV2 173 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CELF5Q8N6W0 485 aaKnown RBP20.36■□□□□ 0.85
CRAT-202ENST00000393384 BPIFB1Q8TDL5 484 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 PARD3BQ8TEW8 1205 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CCDC47Q96A33 483 aaKnown RBP20.36■□□□□ 0.85
CRAT-202ENST00000393384 TRMT2BQ96GJ1 504 aaKnown RBP20.36■□□□□ 0.85
CRAT-202ENST00000393384 MSANTD3Q96H12 275 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 MYRFLQ96LU7 910 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 CRTAC1Q9NQ79 661 aa20.36■□□□□ 0.85
CRAT-202ENST00000393384 SLC38A8A6NNN8 435 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 RHOBTB3O94955 611 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 KIF20AO95235 890 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 PRAMEF12O95522 483 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 PDGFRBP09619 1106 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 GNL1P36915 607 aaPredicted RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 CASP4P49662 377 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 MYL6P60660 151 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 PSMC1P62191 440 aaKnown RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 TNNC1P63316 161 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 KRBA2Q6ZNG9 492 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 MAB21L3Q8N8X9 362 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 FSIP1Q8NA03 581 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 STKLD1Q8NE28 680 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 PLEKHO2Q8TD55 490 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 MRPS31Q92665 395 aaKnown RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 MYLPFQ96A32 169 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 SYAP1Q96A49 352 aaPredicted RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 MRPL45Q9BRJ2 306 aaKnown RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 SNX25Q9H3E2 840 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 C8orf33Q9H7E9 229 aaPredicted RBP20.35■□□□□ 0.85
CRAT-202ENST00000393384 MYH10P35580 1976 aa20.35■□□□□ 0.85
CRAT-202ENST00000393384 LRRIQ3A6PVS8 624 aaPredicted RBP20.34■□□□□ 0.85
CRAT-202ENST00000393384 PHACTR2O75167 634 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 PRR29P0C7W0 189 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 AVPR1AP37288 418 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 PLCB2Q00722 1185 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 DPYDQ12882 1025 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 BECN1Q14457 450 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 LAIR1Q6GTX8 287 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 VSTM1Q6UX27 236 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 MON1AQ86VX9 555 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 SCN4BQ8IWT1 228 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 OR6B3Q8NGW1 331 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 MYCBPAPQ8TBZ2 947 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 CEP295NLQ96MC4 621 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 XYLT2Q9H1B5 865 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 VRTNQ9H8Y1 702 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 LMAN1LQ9HAT1 526 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 THG1LQ9NWX6 298 aaKnown RBP20.34■□□□□ 0.85
CRAT-202ENST00000393384 TRAF3IP3Q9Y228 551 aa20.34■□□□□ 0.85
CRAT-202ENST00000393384 CALUO43852 315 aaPredicted RBP20.33■□□□□ 0.85
CRAT-202ENST00000393384 ZNF202O95125 648 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 C4BPAP04003 597 aaKnown RBP20.33■□□□□ 0.85
CRAT-202ENST00000393384 NR3C1P04150 777 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 CCNE1P24864 410 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 KPNA1P52294 538 aaPredicted RBP20.33■□□□□ 0.85
CRAT-202ENST00000393384 TDRD10Q5VZ19 366 aaKnown RBP20.33■□□□□ 0.85
CRAT-202ENST00000393384 TXNDC8Q6A555 127 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 PCED1BQ96HM7 432 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 ZFYVE19Q96K21 471 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 SPATA17Q96L03 361 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 SMG9Q9H0W8 520 aaKnown RBP20.33■□□□□ 0.85
CRAT-202ENST00000393384 GOLPH3LQ9H4A5 285 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 KIF9Q9HAQ2 790 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 PARD6AQ9NPB6 346 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 NME7Q9Y5B8 376 aa20.33■□□□□ 0.85
CRAT-202ENST00000393384 LRP3O75074 770 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 TADA3O75528 432 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 BDNFP23560 247 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 GRIK1P39086 918 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 CYP27A1Q02318 531 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 BIRC3Q13489 604 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 ZNF268Q14587 947 aaPredicted RBP20.32■□□□□ 0.84
CRAT-202ENST00000393384 RALGPS2Q86X27 583 aaPredicted RBP20.32■□□□□ 0.84
CRAT-202ENST00000393384 TMC2Q8TDI7 906 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 USP13Q92995 863 aaPredicted RBP20.32■□□□□ 0.84
CRAT-202ENST00000393384 GDPD2Q9HCC8 539 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 TDP1Q9NUW8 608 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 GTSE1Q9NYZ3 720 aa20.32■□□□□ 0.84
CRAT-202ENST00000393384 NXF1Q9UBU9 619 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms