RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RAPGEF5Q92565 580 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 ERLIN1O75477 346 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 THP07101 528 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 IVLP07476 585 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 TFE3P19532 575 aaPredicted RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 PSMA2P25787 234 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 DSC3Q14574 896 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 PKDCCQ504Y2 493 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 CCDC70Q6NSX1 233 aa15.78■□□□□ 0.12
MKS1-202ENST00000393119 MAGOHBQ96A72 148 aaKnown RBP15.78■□□□□ 0.12
MKS1-202ENST00000393119 BRCC3P46736 316 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 CDO1Q16878 200 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 RPAINQ86UA6 219 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
MKS1-202ENST00000393119 LINC01599Q8WXQ3 324 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 CALR3Q96L12 384 aaKnown RBP15.77■□□□□ 0.12
MKS1-202ENST00000393119 RHOBTB2Q9BYZ6 727 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 IP6K2Q9UHH9 426 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 CASP8AP2Q9UKL3 1982 aa15.77■□□□□ 0.12
MKS1-202ENST00000393119 SIGLEC16A6NMB1 481 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 PODXLO00592 558 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 HUS1O60921 280 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 CD48P09326 243 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.11
MKS1-202ENST00000393119 MFSD7Q6UXD7 560 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.77■□□□□ 0.11
MKS1-202ENST00000393119 HAUS1Q96CS2 278 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 SENP8Q96LD8 212 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 DEFB118Q96PH6 123 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 ADAM33Q9BZ11 813 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 SNX25Q9H3E2 840 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.11
MKS1-202ENST00000393119 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.11
MKS1-202ENST00000393119 LRCH4O75427 683 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 LCP1P13796 627 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 SLC1A1P43005 524 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 TRIP13Q15645 432 aaPredicted RBP15.76■□□□□ 0.11
MKS1-202ENST00000393119 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 RHOT1Q8IXI2 618 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 SLC35F5Q8WV83 523 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 KHSRPQ92945 711 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-202ENST00000393119 C10orf88Q9H8K7 445 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 CHST12Q9NRB3 414 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 A0A0U1RQF3 1178 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 PAPSS1O43252 624 aaPredicted RBP15.76■□□□□ 0.11
MKS1-202ENST00000393119 LRPAP1P30533 357 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 PTGIRP43119 386 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
MKS1-202ENST00000393119 ATP11AP98196 1134 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 DR1Q01658 176 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 GPNMBQ14956 572 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 TIGD5Q53EQ6 642 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 GLE1Q53GS7 698 aaKnown RBP15.76■□□□□ 0.11
MKS1-202ENST00000393119 B4GALNT4Q76KP1 1039 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 MCRS1Q96EZ8 462 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 FAXDC2Q96IV6 333 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-202ENST00000393119 TMEM30AQ9NV96 361 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 HCSTQ9UBK5 93 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 SNX24Q9Y343 169 aa15.76■□□□□ 0.11
MKS1-202ENST00000393119 CCDC188H7C350 402 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 MAGEA9P43362 315 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 GABRB2P47870 512 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 CACNA2D1P54289 1103 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 HLTFQ14527 1009 aaKnown RBP eCLIP15.75■□□□□ 0.11
MKS1-202ENST00000393119 SV2CQ496J9 727 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 CCDC137Q6PK04 289 aaKnown RBP15.75■□□□□ 0.11
MKS1-202ENST00000393119 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 PAQR9Q6ZVX9 377 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 HDXQ7Z353 690 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 ZNF280BQ86YH2 543 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 IFT20Q8IY31 132 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 SLAIN1Q8ND83 568 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 ZNF560Q96MR9 790 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 RSAD1Q9HA92 442 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 RALGAPA2Q2PPJ7 1873 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 MYBPHLA2RUH7 354 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 KRT1P04264 644 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 NDUFV1P49821 464 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 GATMP50440 423 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 MDH1BQ5I0G3 518 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 UBAP2Q5T6F2 1119 aaKnown RBP15.75■□□□□ 0.11
MKS1-202ENST00000393119 ICE2Q659A1 982 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 LIMS2Q7Z4I7 341 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 MRPL10Q7Z7H8 261 aaKnown RBP15.75■□□□□ 0.11
MKS1-202ENST00000393119 JAMLQ86YT9 394 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 PEBP4Q96S96 227 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 TMEM209Q96SK2 561 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 CRTAC1Q9NQ79 661 aa15.75■□□□□ 0.11
MKS1-202ENST00000393119 MOXD2PA6NHM9 499 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 FSCN2O14926 492 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 PHF2O75151 1096 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 B3GAT3O94766 335 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 SLC25A11Q02978 314 aaKnown RBP15.74■□□□□ 0.11
MKS1-202ENST00000393119 UPP1Q16831 310 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 FOXR1Q6PIV2 292 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 ECHDC2Q86YB7 292 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms