RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 FAM114A2Q9NRY5 505 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 RASAL2Q9UJF2 1139 aa22.49■■□□□ 1.19
SPHK1-202ENST00000392496 PODXLO00592 558 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 COILP38432 576 aaPredicted RBP22.48■■□□□ 1.19
SPHK1-202ENST00000392496 PTGIRP43119 386 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 AFF1P51825 1210 aaKnown RBP22.48■■□□□ 1.19
SPHK1-202ENST00000392496 OR6B2Q6IFH4 312 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 PMF1Q6P1K2 205 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 CCDC137Q6PK04 289 aaKnown RBP22.48■■□□□ 1.19
SPHK1-202ENST00000392496 SEZ6LQ9BYH1 1024 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 CYLDQ9NQC7 956 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 ARVCFO00192 962 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 HCRTO43612 131 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 TCF4P15884 667 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 GJC1P36383 396 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 BCAT1P54687 386 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 COPS2P61201 443 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 PDE4CQ08493 712 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 BST2Q10589 180 aaKnown RBP22.48■■□□□ 1.19
SPHK1-202ENST00000392496 TRADDQ15628 312 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 TTC27Q6P3X3 843 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 TRAF7Q6Q0C0 670 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 FAM183BPQ6ZVS7 135 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 JAMLQ86YT9 394 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 OSBPL8Q9BZF1 889 aa22.48■■□□□ 1.19
SPHK1-202ENST00000392496 GABRDO14764 452 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 RALAP11233 206 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 RGS7P49802 495 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 GPS2Q13227 327 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 KLF1Q13351 362 aaPredicted RBP22.47■■□□□ 1.19
SPHK1-202ENST00000392496 HADHQ16836 314 aaKnown RBP22.47■■□□□ 1.19
SPHK1-202ENST00000392496 ZDHHC17Q8IUH5 632 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 TMEM86AQ8N2M4 240 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 EMC1Q8N766 993 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 SENP8Q96LD8 212 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 LPIN3Q9BQK8 851 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 ERP44Q9BS26 406 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.47■■□□□ 1.194e-6■■■□□ 15.6
SPHK1-202ENST00000392496 HOMER3Q9NSC5 361 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 HPCAL4Q9UM19 191 aa22.47■■□□□ 1.19
SPHK1-202ENST00000392496 KBTBD13C9JR72 458 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 TULP2O00295 520 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 LRCH4O75427 683 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 KRT1P04264 644 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 CCDC130P13994 396 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 PTPN7P35236 360 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 RPL34P49207 117 aaKnown RBP22.46■■□□□ 1.19
SPHK1-202ENST00000392496 CLCNKBP51801 687 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 SMC1AQ14683 1233 aaKnown RBP22.46■■□□□ 1.19
SPHK1-202ENST00000392496 DUPD1Q68J44 220 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 ECHDC2Q86YB7 292 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 SH3TC2Q8TF17 1288 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 SLCO2A1Q92959 643 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 GDAP1L1Q96MZ0 367 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 SLITRK1Q96PX8 696 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 HERPUD2Q9BSE4 406 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 TRIM51Q9BSJ1 452 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 ASNSD1Q9NWL6 643 aa22.46■■□□□ 1.19
SPHK1-202ENST00000392496 CENPFP49454 3210 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 KRT7P08729 469 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 GPD1P21695 349 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 ECHS1P30084 290 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 ZNF143P52747 638 aaPredicted RBP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 DRG2P55039 364 aaKnown RBP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 SLC25A11Q02978 314 aaKnown RBP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 GRIK3Q13003 919 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 HLTFQ14527 1009 aaKnown RBP eCLIP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 ATP13A4Q4VNC1 1196 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 WSCD1Q658N2 575 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 ZNF598Q86UK7 904 aaKnown RBP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 ARFGAP1Q8N6T3 406 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 B3GALNT2Q8NCR0 500 aa22.45■■□□□ 1.19
SPHK1-202ENST00000392496 HNRNPABQ99729 332 aaKnown RBP22.45■■□□□ 1.19
SPHK1-202ENST00000392496 C2CD4BA6NLJ0 364 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 INPPL1O15357 1258 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 DAPK3O43293 454 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 PAX3P23760 479 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 ADORA2BP29275 332 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 LHX1P48742 406 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 AARSP49588 968 aaKnown RBP eCLIP22.45■■□□□ 1.18
SPHK1-202ENST00000392496 CBX1P83916 185 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 SLC6A3Q01959 620 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 UPP1Q16831 310 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 OLFML1Q6UWY5 402 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 CCDC105Q8IYK2 499 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 MREGQ8N565 214 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 RNF169Q8NCN4 708 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 RNF25Q96BH1 459 aaPredicted RBP22.45■■□□□ 1.18
SPHK1-202ENST00000392496 CNPY3Q9BT09 278 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 RGS18Q9NS28 235 aa22.45■■□□□ 1.18
SPHK1-202ENST00000392496 TDRD15B5MCY1 1934 aaKnown RBP22.44■■□□□ 1.18
SPHK1-202ENST00000392496 RNF8O76064 485 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 ACADSBP45954 432 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 LLGL1Q15334 1064 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 ODF2Q5BJF6 829 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 ZFYVE27Q5T4F4 411 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 TXNRD3NBQ6F5E7 133 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 DSTYKQ6XUX3 929 aa22.44■■□□□ 1.18
SPHK1-202ENST00000392496 DDX42Q86XP3 938 aaKnown RBP eCLIP22.44■■□□□ 1.18
SPHK1-202ENST00000392496 SLC2A14Q8TDB8 520 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms