RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CUL1Q13616 776 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 CASP8Q14790 479 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 EMBQ6PCB8 327 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM183BPQ6ZVS7 135 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 ZDHHC17Q8IUH5 632 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 RNF169Q8NCN4 708 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 B3GALNT2Q8NCR0 500 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 CASKIN2Q8WXE0 1202 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM187AA6NFU0 413 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 C9IYK1 514 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 TULP2O00295 520 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 TTI1O43156 1089 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 EOMESO95936 686 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 FNTAP49354 379 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 CARSP49589 748 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 DR1Q01658 176 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 RCOR2Q8IZ40 523 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 C3orf58Q8NDZ4 430 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 PLEKHA4Q9H4M7 779 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 LRRC19Q9H756 370 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 DDX56Q9NY93 547 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 CASTOR2A6NHX0 329 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 LRCH4O75427 683 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 TCF4P15884 667 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 IGFBP6P24592 240 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 ADORA2BP29275 332 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 LHX1P48742 406 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 RGS7P49802 495 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 ZNF143P52747 638 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 COPS2P61201 443 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 KLF1Q13351 362 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 NNTQ13423 1086 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 TUSC3Q13454 348 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 OR6B2Q6IFH4 312 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 OLFML1Q6UWY5 402 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 LRRC8DQ7L1W4 858 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 CCDC50Q8IVM0 306 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM126BQ8IXS8 530 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 EMC1Q8N766 993 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 SPATA18Q8TC71 538 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC2A14Q8TDB8 520 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 CAVIN3Q969G5 261 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 UROC1Q96N76 676 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 VIPAS39Q9H9C1 493 aa12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-203ENST00000392128 C2CD4BA6NLJ0 364 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 POMCP01189 267 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 RALAP11233 206 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 SELPP16109 830 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 PTPN1P18031 435 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 GPD1P21695 349 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 PTPN7P35236 360 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 SCNN1AP37088 669 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 CETN2P41208 172 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM189BP81408 668 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC6A3Q01959 620 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC25A11Q02978 314 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 CCDC137Q6PK04 289 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 RTN4RL1Q86UN2 441 aaPredicted RBP12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 FTHL17Q9BXU8 183 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 OSBPL8Q9BZF1 889 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
SMARCAL1-203ENST00000392128 KRT7P08729 469 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 GJC1P36383 396 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 COILP38432 576 aaPredicted RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 PTGIRP43119 386 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 ACADSBP45954 432 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 BFSP2Q13515 415 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 HADHQ16836 314 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 TTC27Q6P3X3 843 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 LINC01599Q8WXQ3 324 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 IFT81Q8WYA0 676 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLCO2A1Q92959 643 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 HSFY1Q96LI6 401 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLITRK1Q96PX8 696 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 PAAF1Q9BRP4 392 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 HERPUD2Q9BSE4 406 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 ASNSD1Q9NWL6 643 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 DDX43Q9NXZ2 648 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 OGDHLQ9ULD0 1010 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 PIK3R2O00459 728 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 DPYSL4O14531 572 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 XPO1O14980 1071 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms