RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
RAPGEF3-201ENST00000389212 FAM189A1O60320 539 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 FOXN2P32314 431 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 CLCN3P51790 818 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ZNF132P52740 706 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 GDF10P55107 478 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 TMED1Q13445 227 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 PTPN20Q4JDL3 420 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 GALNT15Q8N3T1 639 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 RMDN2Q96LZ7 410 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 NIFKQ9BYG3 293 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 HMGXB4Q9UGU5 601 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 CHMP2BQ9UQN3 213 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 H0Y3Z8 333 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 CXCL8P10145 99 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 PSMA2P25787 234 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 IL1R2P27930 398 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 RFC5P40937 340 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 KCNJ2P63252 427 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 NANOGNBQ7Z5D8 188 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 TMEM35BQ8NCS4 154 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 TSPAN18Q96SJ8 248 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ACO2Q99798 780 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 MRPL4Q9BYD3 311 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 AGTPBP1Q9UPW5 1226 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 TOM1L1O75674 476 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 BAG6P46379 1132 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 DUOXA2Q1HG44 320 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ANKRD20A2Q5SQ80 823 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ANKRD20A1Q5TYW2 823 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 ANKRD20A3Q5VUR7 823 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 CGB2Q6NT52 195 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 C16orf87Q6PH81 154 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 RCOR2Q8IZ40 523 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 C12orf65Q9H3J6 166 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 CCDC134Q9H6E4 229 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 MINDY3Q9H8M7 445 aa12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 USP15Q9Y4E8 981 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-201ENST00000389212 POLR2AP24928 1970 aaKnown RBP12.27□□□□□ -0.44
RAPGEF3-201ENST00000389212 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 DNALI1O14645 258 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 CDH16O75309 829 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 STAM2O75886 525 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 TJP3O95049 919 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 KRT15P19012 456 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 GCAP28676 217 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ICAM3P32942 547 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 CETN2P41208 172 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 WDR4P57081 412 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ATP11AP98196 1134 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 PDIA2Q13087 525 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 BLMHQ13867 455 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ITIH4Q14624 930 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 RAB6CQ53S08 254 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 GJC2Q5T442 439 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ANKRD22Q5VYY1 191 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 FBXO16Q8IX29 292 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ZCCHC9Q8N567 271 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 UBR7Q8N806 425 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 LRRN4Q8WUT4 740 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 C17orf50Q8WW18 174 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 CKAP2Q8WWK9 683 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 NAF1Q96HR8 494 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 VCPIP1Q96JH7 1222 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 PAIP2BQ9ULR5 123 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 CNTN6Q9UQ52 1028 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 IGKV6D-21A0A0A0MT36 114 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 FZD9O00144 591 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 NOP56O00567 594 aaKnown RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 MAFO75444 373 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 HOXC6P09630 235 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 CAV1Q03135 178 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 DNAJC3Q13217 504 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 MAPK6Q16659 721 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 WDR49Q8IV35 697 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ALLCQ8N6M5 410 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 ARFGAP1Q8N6T3 406 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 TWNKQ96RR1 684 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 SLCO1B3Q9NPD5 702 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 PCMTD2Q9NV79 361 aa12.27□□□□□ -0.45
RAPGEF3-201ENST00000389212 A0A1W2PPM1 405 aa12.26□□□□□ -0.45
RAPGEF3-201ENST00000389212 TCRBV5S1A1TA0A578 114 aa12.26□□□□□ -0.45
RAPGEF3-201ENST00000389212 LSM1O15116 133 aaKnown RBP12.26□□□□□ -0.45
RAPGEF3-201ENST00000389212 OGTO15294 1046 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms