RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ASTN1O14525 1302 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 LRRC37A3O60309 1634 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 NDC80O14777 642 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 SETSIPP0DME0 302 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 SERPINB3P29508 390 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 FLT3LGP49771 235 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 TAF1BQ53T94 588 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 DCAF6Q58WW2 860 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 TMEM161BQ8NDZ6 487 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 GTF3C2Q8WUA4 911 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 NMD3Q96D46 503 aaKnown RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 SPON2Q9BUD6 331 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 PARVAQ9NVD7 372 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 C2CD2Q9Y426 696 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 E2F8A0AVK6 867 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 KRT10P13645 584 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 CREB1P16220 341 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ACO1P21399 889 aaKnown RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 GNL1P36915 607 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ARSEP51690 589 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 FSCN1Q16658 493 aaKnown RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 LGSNQ5TDP6 509 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 GLB1LQ6UWU2 654 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 FAM43BQ6ZT52 329 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-202ENST00000383738 CENPUQ71F23 418 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 RHOT1Q8IXI2 618 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ACTRT1Q8TDG2 376 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 KIF3CO14782 793 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 SNX3O60493 162 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ATP5HO75947 161 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 PDE1BQ01064 536 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ZNF484Q5JVG2 852 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 CHADLQ6NUI6 762 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 PRUNE1Q86TP1 453 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 BBOF1Q8ND07 529 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 ASNSD1Q9NWL6 643 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 NUP98P52948 1817 aa19.7■□□□□ 0.74
CSPG5-202ENST00000383738 MARCKSL1P49006 195 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 NBPF20Q3BBV1 942 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 B4GALNT2Q8NHY0 566 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 BAP1Q92560 729 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ABI2Q9NYB9 513 aaPredicted RBP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 HEY2Q9UBP5 337 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 CASQ2O14958 399 aaPredicted RBP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 SUPT3HO75486 399 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 TJP3O95049 919 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 COILP38432 576 aaPredicted RBP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 CAPSQ13938 189 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ITIH4Q14624 930 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 AGGF1Q8N302 714 aaeCLIP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 BSNDQ8WZ55 320 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ZNF560Q96MR9 790 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ETS2P15036 469 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 CYTH1Q15438 398 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 SPRED3Q2MJR0 410 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 DAB2IPQ5VWQ8 1189 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 OR5B17Q8NGF7 314 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ARHGEF26Q96DR7 871 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 URB1O60287 2271 aaKnown RBP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 SPATA31C2B4DYI2 1134 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 RASSF9O75901 435 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 ZC3H15Q8WU90 426 aaKnown RBP19.69■□□□□ 0.74
CSPG5-202ENST00000383738 NUF2Q9BZD4 464 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 GPATCH2LQ9NWQ4 482 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 TAS2R14Q9NYV8 317 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 RBPJLQ9UBG7 517 aa19.69■□□□□ 0.74
CSPG5-202ENST00000383738 DDX3XO00571 662 aaKnown RBP eCLIP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 URGCPQ8TCY9 931 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 FAF2Q96CS3 445 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 SEPT5Q99719 369 aaPredicted RBP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 STARD7Q9NQZ5 370 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 MYO7AQ13402 2215 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 TLR2O60603 784 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 TPD52P55327 224 aaPredicted RBP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 MFSD10Q14728 455 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 PDZD4Q76G19 769 aaPredicted RBP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 NLRP9Q7RTR0 991 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 PDIK1LQ8N165 341 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 MTMR14Q8NCE2 650 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 PPP4R1Q8TF05 950 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 HIC2Q96JB3 615 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 TNIP3Q96KP6 325 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 SPECC1L-ADORA2AF8WAN1 911 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 ATP4AP20648 1035 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 GARTP22102 1010 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 GOLGA7BQ2TAP0 167 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 DEFB115Q30KQ5 88 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 RNF208Q9H0X6 261 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 CARD9Q9H257 536 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 ARMCX1Q9P291 453 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 KLHL8Q9P2G9 620 aaPredicted RBP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 CPSF3Q9UKF6 684 aaKnown RBP19.68■□□□□ 0.74
CSPG5-202ENST00000383738 STRIP2Q9ULQ0 834 aa19.68■□□□□ 0.74
CSPG5-202ENST00000383738 MYH13Q9UKX3 1938 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 LACTBL1A8MY62 500 aa19.67■□□□□ 0.74
CSPG5-202ENST00000383738 DNAJC8O75937 253 aaPredicted RBP19.67■□□□□ 0.74
CSPG5-202ENST00000383738 KRT4P19013 534 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms