RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 RBP5P82980 135 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PTPN12Q05209 780 aaKnown RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 SPP2Q13103 211 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PDK1Q15118 436 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PEG10Q86TG7 708 aaKnown RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 APLFQ8IW19 511 aaPredicted RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 IL17REQ8NFR9 667 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 MCRS1Q96EZ8 462 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PPP1R2P1Q96PQ5 205 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PRRG3Q9BZD7 231 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 SCUBE2Q9NQ36 999 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 NAGPAQ9UK23 515 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 CHKBQ9Y259 395 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 ZMYM3Q14202 1370 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 STX7O15400 261 aaKnown RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 CCDC130P13994 396 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 ARF4P18085 180 aaPredicted RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 AKAP5P24588 427 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PFKFB3Q16875 520 aaPredicted RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 AGAP9Q5VTM2 703 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 IRAK1BP1Q5VVH5 260 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 CDC73Q6P1J9 531 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 PGBD2Q6P3X8 592 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 IQCF2Q8IXL9 164 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 TMEM143Q96AN5 459 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 TPD52L3Q96J77 140 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 ILKAPQ9H0C8 392 aaPredicted RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 RSPH9Q9H1X1 276 aaPredicted RBP6.08□□□□□ -1.44
RFX3-204ENST00000382004 OSGEPL1Q9H4B0 414 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 STK39Q9UEW8 545 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 DUSP12Q9UNI6 340 aa6.08□□□□□ -1.44
RFX3-204ENST00000382004 COL17A1Q9UMD9 1497 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 KBTBD13C9JR72 458 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 EIF3HO15372 352 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFX3-204ENST00000382004 CYP27B1O15528 508 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CDC40O60508 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFX3-204ENST00000382004 CD2BP2O95400 341 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 NCAM1P13591 858 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 NMT1P30419 496 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 STX5Q13190 355 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 NCOA4Q13772 614 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 PROSER1Q86XN7 944 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 OXER1Q8TDS5 423 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CEP44Q9C0F1 390 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZBTB1Q9Y2K1 713 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ADGRG1Q9Y653 693 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 UGGT2Q9NYU1 1516 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TRIM66O15016 1216 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ASS1P00966 412 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 LGALS3BPQ08380 585 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 GOLGA7BQ2TAP0 167 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 DENND1BQ6P3S1 775 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 HAUS6Q7Z4H7 955 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 RTKN2Q8IZC4 609 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ADGRF4Q8IZF3 695 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FAM71DQ8N9W8 422 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TERB1Q8NA31 727 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SH2D3AQ9BRG2 576 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CYLDQ9NQC7 956 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TOPBP1Q92547 1522 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 DUOX2Q9NRD8 1548 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TTLL13PA6NNM8 815 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 PSMD12O00232 456 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TAF4O00268 1085 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TGM2P21980 687 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 PTGER2P43116 358 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 DNAJC3Q13217 504 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KPNB1Q14974 876 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 ARHGAP15Q53QZ3 475 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 IKBIPQ70UQ0 350 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MICALL2Q8IY33 904 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 LEMD2Q8NC56 503 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SPACA7Q96KW9 195 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SLITRK2Q9H156 845 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MEI4A8MW99 385 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 VPS26AO75436 327 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 GRK4P32298 578 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KPNA1P52294 538 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 VAC14Q08AM6 782 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TAF2Q6P1X5 1199 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ARID3BQ8IVW6 561 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TTLL6Q8N841 843 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TFB1MQ8WVM0 346 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 SGSM3Q96HU1 749 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 COA1Q9GZY4 146 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CD248Q9HCU0 757 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SLC40A1Q9NP59 571 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SLC9A8Q9Y2E8 581 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 PCDHB7Q9Y5E2 793 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CCT8L1PA6NM43 557 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 C2orf81A6NN90 581 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FAM220BPB1ANY3 271 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FOXP2O15409 715 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ENDOD1O94919 500 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 OR6A2O95222 327 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 HLA-DQA2P01906 255 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 LSP1P33241 339 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZNF284Q2VY69 593 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms