RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 SLFN11Q7Z7L1 901 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 SRGAP2BP0DMP2 458 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 TTC27Q6P3X3 843 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
CDX2-201ENST00000381020 FGFR1OP2Q9NVK5 253 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 PTPRJQ12913 1337 aa13.1□□□□□ -0.31
CDX2-201ENST00000381020 SMCHD1A6NHR9 2005 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 O00370 1275 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 RIPK2O43353 540 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
CDX2-201ENST00000381020 THPOP40225 353 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 STILQ15468 1287 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 DCAF4L1Q3SXM0 396 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 C3orf20Q8ND61 904 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 JOSD2Q8TAC2 188 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 TFAP2BQ92481 460 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 ATXN7L3BQ96GX2 97 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 A0A0G2JND7 137 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 EFHC2Q5JST6 749 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 TBC1D31Q96DN5 1066 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 CNPY3Q9BT09 278 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 WHRNQ9P202 907 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 LCMT1Q9UIC8 334 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
CDX2-201ENST00000381020 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.09□□□□□ -0.31
CDX2-201ENST00000381020 MSCO60682 206 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 TTC4O95801 387 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 CXCL17Q6UXB2 119 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 KDELC2Q7Z4H8 507 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 KATNAL1Q9BW62 490 aa13.09□□□□□ -0.31
CDX2-201ENST00000381020 CASTOR2A6NHX0 329 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.31
CDX2-201ENST00000381020 MMP8P22894 467 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 MROH7Q68CQ1 1323 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 FBXL18Q96ME1 805 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 CYP3A43Q9HB55 503 aa13.08□□□□□ -0.31
CDX2-201ENST00000381020 IQANK1A0A1B0GTG1 560 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 FAM107AO95990 144 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 PGK1P00558 417 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 CCDC130P13994 396 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 BOLA3Q53S33 107 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 PCYT2Q99447 389 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 GOLGA2P5Q9HBQ8 144 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 CPSF3Q9UKF6 684 aaKnown RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 CYB561D2O14569 222 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 KRT37O76014 449 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 RGS2P41220 211 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 CEP41Q9BYV8 373 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 PRG3Q9Y2Y8 225 aaPredicted RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 M0QYT0 321 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 COPEO14579 308 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 CHKAP35790 457 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 WNT7BP56706 349 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 E2F5Q15329 346 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.32
CDX2-201ENST00000381020 LRRC34Q8IZ02 419 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 SEC16BQ96JE7 1060 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 PCYOX1Q9UHG3 505 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 ITGA11Q9UKX5 1188 aa13.08□□□□□ -0.32
CDX2-201ENST00000381020 SLC4A1P02730 911 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 NCAM1P13591 858 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 ATICP31939 592 aa13.07□□□□□ -0.32
CDX2-201ENST00000381020 VCPP55072 806 aaKnown RBP13.07□□□□□ -0.32
CDX2-201ENST00000381020 MCL1Q07820 350 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms