RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 A8MXQ7 604 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 ATP2C2O75185 946 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 TACC1O75410 805 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 MBD3O95983 291 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 RHOP08100 348 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 FAM163BP0C2L3 166 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 PTPN2P17706 415 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 LMO2P25791 158 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 TUFMP49411 452 aaKnown RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 MXI1P50539 228 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 EPHB3P54753 998 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CDH8P55286 799 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 NLRP12P59046 1061 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CACNA1BQ00975 2339 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CYP27A1Q02318 531 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 SMARCB1Q12824 385 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CCDC142Q17RM4 750 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 KRT39Q6A163 491 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 THSD4Q6ZMP0 1018 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 PDZD4Q76G19 769 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 LIMS2Q7Z4I7 341 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 FRMD5Q7Z6J6 570 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CREBRFQ8IUR6 639 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 SPATA2LQ8IUW3 424 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 ITFG1Q8TB96 612 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 SPPL2BQ8TCT7 592 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 TAS1R2Q8TE23 839 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 GIPC2Q8TF65 315 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 ING5Q8WYH8 240 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 MYADMQ96S97 322 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 SDCBP2Q9H190 292 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 VRTNQ9H8Y1 702 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 METTL14Q9HCE5 456 aaKnown RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CEP72Q9P209 647 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 MRPS23Q9Y3D9 190 aaKnown RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 TPRP12270 2363 aaKnown RBP9.86□□□□□ -0.83
HMGN1-202ENST00000380747 LRRN2O75325 713 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 FGFR1OPO95684 399 aaKnown RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 ASS1P00966 412 aaKnown RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 ASGR2P07307 311 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 MYL4P12829 197 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 ID4P47928 161 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 GPR15P49685 360 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 NOP14P78316 857 aaKnown RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 VEPH1Q14D04 833 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 TAF12Q16514 161 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 TPD52L1Q16890 204 aaPredicted RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 DPCR1Q3MIW9 517 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 MDH1BQ5I0G3 518 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 FBXL13Q8NEE6 735 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 MYLPFQ96A32 169 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 PKMYT1Q99640 499 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 LPIN3Q9BQK8 851 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 DPEP3Q9H4B8 488 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 APOBEC3GQ9HC16 384 aaKnown RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 ASAH2Q9NR71 780 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 HSFX1Q9UBD0 423 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 MAGEC2Q9UBF1 373 aaPredicted RBP9.85□□□□□ -0.83
HMGN1-202ENST00000380747 NME7Q9Y5B8 376 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 PCDHB3Q9Y5E6 796 aa9.85□□□□□ -0.83
HMGN1-202ENST00000380747 ZNF197O14709 1029 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 GNA14O95837 355 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CCDC192P0DO97 292 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 GJA1P17302 382 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 PTPN1P18031 435 aaKnown RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ATF6P18850 670 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CD58P19256 250 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CYP2F1P24903 491 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ASPAP45381 313 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 MCCD1P59942 119 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ORC1Q13415 861 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 MAPRE1Q15691 268 aaKnown RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 DDR2Q16832 855 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 SLC5A9Q2M3M2 681 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CBWD6Q4V339 395 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CBWD3Q5JTY5 395 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CBWD5Q5RIA9 395 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 SDHAF4Q5VUM1 108 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 FAM171BQ6P995 826 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 BLOC1S3Q6QNY0 202 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 C4orf50Q6ZRC1 276 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ITIH5Q86UX2 942 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 LEMD2Q8NC56 503 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ST13P5Q8NFI4 369 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms