RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 FLRT1Q9NZU1 646 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 IGHA2P01877 340 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 TCF4P15884 667 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 PNPLA4P41247 253 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 ZNF143P52747 638 aaPredicted RBP24.3■■□□□ 1.48
VPS16-201ENST00000380443 CRYBB1P53674 252 aaPredicted RBP24.3■■□□□ 1.48
VPS16-201ENST00000380443 VCPP55072 806 aaKnown RBP24.3■■□□□ 1.48
VPS16-201ENST00000380443 XKR4Q5GH76 650 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 ALLCQ8N6M5 410 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 CNPY3Q9BT09 278 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 TSPAN16Q9UKR8 245 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 GINS2Q9Y248 185 aa24.3■■□□□ 1.48
VPS16-201ENST00000380443 C3orf70A6NLC5 250 aaPredicted RBP24.29■■□□□ 1.48
VPS16-201ENST00000380443 KRT10P13645 584 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 CYP3A5P20815 502 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 LSP1P33241 339 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 SNX17Q15036 470 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 KAZNQ674X7 775 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 ARHGAP17Q68EM7 881 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 BBS12Q6ZW61 710 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 ZDHHC17Q8IUH5 632 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 CMASQ8NFW8 434 aaPredicted RBP24.29■■□□□ 1.48
VPS16-201ENST00000380443 EIF2AQ9BY44 585 aaKnown RBP24.29■■□□□ 1.48
VPS16-201ENST00000380443 CDHR5Q9HBB8 845 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 AAASQ9NRG9 546 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 ZNF148Q9UQR1 794 aa24.29■■□□□ 1.48
VPS16-201ENST00000380443 C17orf102A2RUQ5 167 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 MYL3P08590 195 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 KCNE1P15382 129 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 DESP17661 470 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 KDELR1P24390 212 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 HOXC8P31273 242 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 TMEM62Q0P6H9 643 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 MFSD5Q6N075 450 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 DNAJB3Q8WWF6 145 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 ZNF560Q96MR9 790 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 ZMAT2Q96NC0 199 aaKnown RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 EPN3Q9H201 632 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 CDC42EP4Q9H3Q1 356 aaKnown RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 SLC12A6Q9UHW9 1150 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 RGS16O15492 202 aaPredicted RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 TCEA3O75764 348 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 SHBGP04278 402 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 GPD1P21695 349 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 HPDP32754 393 aaPredicted RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 MAGOHP61326 146 aaKnown RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 ORC1Q13415 861 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 OASLQ15646 514 aaKnown RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 FAM102AQ5T9C2 384 aaPredicted RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 IZUMO3Q5VZ72 239 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 C9orf57Q5W0N0 161 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 HIBCHQ6NVY1 386 aaPredicted RBP24.28■■□□□ 1.48
VPS16-201ENST00000380443 CCDC25Q86WR0 208 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 BCAS4Q8TDM0 211 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 KLHL11Q9NVR0 708 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 DNPEPQ9ULA0 475 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 SNX9Q9Y5X1 595 aa24.28■■□□□ 1.48
VPS16-201ENST00000380443 CAND2O75155 1236 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 RECQL4O94761 1208 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 TTC4O95801 387 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 FAM163BP0C2L3 166 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 RDXP35241 583 aaKnown RBP24.27■■□□□ 1.48
VPS16-201ENST00000380443 KCTD19Q17RG1 926 aaPredicted RBP24.27■■□□□ 1.48
VPS16-201ENST00000380443 PKDCCQ504Y2 493 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 ARFGAP1Q8N6T3 406 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 SLC35B2Q8TB61 432 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 CENPTQ96BT3 561 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 SLC4A5Q9BY07 1137 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 CYLDQ9NQC7 956 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 GDAP2Q9NXN4 497 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 HESX1Q9UBX0 185 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 TJP2Q9UDY2 1190 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 GJD2Q9UKL4 321 aa24.27■■□□□ 1.48
VPS16-201ENST00000380443 DPYSL4O14531 572 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 DNALI1O14645 258 aaPredicted RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 RASGRF2O14827 1237 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 TRUB2O95900 331 aaKnown RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 TRIP13Q15645 432 aaPredicted RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 GOLGA7BQ2TAP0 167 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 TXNRD3NBQ6F5E7 133 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 TAF2Q6P1X5 1199 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 PCGF5Q86SE9 256 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 ZCCHC9Q8N567 271 aaKnown RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 UBA3Q8TBC4 463 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 SERPINB12Q96P63 405 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 RSAD1Q9HA92 442 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 PCDH9Q9HC56 1237 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 PIN4Q9Y237 131 aaKnown RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 C2CD4BA6NLJ0 364 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 PIRO00625 290 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 ATP5DP30049 168 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 PTGISQ16647 500 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 TNFAIP8L3Q5GJ75 292 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 TMEM110Q86TL2 294 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 ZWILCHQ9H900 591 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 USP18Q9UMW8 372 aa24.26■■□□□ 1.47
VPS16-201ENST00000380443 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.26■■□□□ 1.47
VPS16-201ENST00000380443 TREHO43280 583 aa24.25■■□□□ 1.47
VPS16-201ENST00000380443 ECM2O94769 699 aaPredicted RBP24.25■■□□□ 1.47
VPS16-201ENST00000380443 PFKMP08237 780 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms