RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 IMPG2Q9BZV3 1241 aa13.05□□□□□ -0.32
PRPF40B-202ENST00000380281 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MAPK13O15264 365 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM155BO75949 473 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 EDN1P05305 212 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 HSPA1LP34931 641 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 PTGER2P43116 358 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RASSF2P50749 326 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ACTR2P61160 394 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CCNG2Q16589 344 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 LIN52Q52LA3 116 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MON1BQ7L1V2 547 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ARL10Q8N8L6 244 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MORC4Q8TE76 937 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 WDR60Q8WVS4 1066 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MAP3K7O43318 606 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SUPT3HO75486 399 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 HNRNPCP07910 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CCDC15Q0P6D6 951 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 LSAMPQ13449 338 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 STAT4Q14765 748 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MAPK6Q16659 721 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RAB6CQ53S08 254 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CFAP157Q5JU67 520 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 WDR78Q5VTH9 848 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SCYL2Q6P3W7 929 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 PPP1R21Q6ZMI0 780 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 TRABD2AQ86V40 505 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 INPP5DQ92835 1189 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RAB6CQ9H0N0 254 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF395Q9H8N7 513 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 NUMBLQ9Y6R0 609 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ATP5HO75947 161 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 OR6B1O95007 311 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 PSMA2P25787 234 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 RFC1P35251 1148 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 OCRLQ01968 901 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CNTN2Q02246 1040 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 FNBP1LQ5T0N5 605 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CFAP36Q96G28 342 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF184Q99676 751 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SENP7Q9BQF6 1050 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 JPH1Q9HDC5 661 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CLIC5Q9NZA1 410 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 ZFP69BQ9UJL9 534 aa13.04□□□□□ -0.32
PRPF40B-202ENST00000380281 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 LIASO43766 372 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 MTA2O94776 668 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 KRT76Q01546 638 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 TMED1Q13445 227 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 EMC2Q15006 297 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 ISLR2Q6UXK2 745 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 OTOAQ7RTW8 1153 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 RFX6Q8HWS3 928 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 FBXO36Q8NEA4 188 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 TCP10LQ8TDR4 215 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 MAML1Q92585 1016 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 MPP4Q96JB8 637 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 HSFX1Q9UBD0 423 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 MAGEB3O15480 346 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 GCAP28676 217 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 SERPINB3P29508 390 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 YARSP54577 528 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 SP2Q02086 613 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 TRPC3Q13507 836 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 HIF1AQ16665 826 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 ZACNQ401N2 412 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms