RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 GLTPD2A6NH11 291 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SRRM3A6NNA2 597 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 MED7O43513 233 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 GPD2P43304 727 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ARSEP51690 589 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 TNFAIP2Q03169 654 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 TAP1Q03518 808 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM132DQ14C87 1099 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 DPP9Q86TI2 863 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ALLCQ8N6M5 410 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ASB7Q9H672 318 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CNOT10Q9H9A5 744 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CDHR5Q9HBB8 845 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SETD4Q9NVD3 440 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 STRIP2Q9ULQ0 834 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SCN4AP35499 1836 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 M0QYV0 167 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 PPEF2O14830 753 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 MMP3P08254 477 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CETN2P41208 172 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 LIG3P49916 1009 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 NDST1P52848 882 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CAV1Q03135 178 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 FASTKD3Q14CZ7 662 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 MFSD5Q6N075 450 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 B4GALNT4Q76KP1 1039 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 NPLOC4Q8TAT6 608 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 MAML3Q96JK9 1138 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ACAP3Q96P50 834 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 PRMT1Q99873 361 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ROPN1BQ9BZX4 212 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 SYNCQ9H7C4 482 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ROPN1Q9HAT0 212 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 HES2Q9Y543 173 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 DRD4P21917 467 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GDF10P55107 478 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 COPS2P61201 443 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GPS1Q13098 491 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 IFT88Q13099 833 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 PRAMEF19Q5SWL8 479 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 TRNP1Q6NT89 227 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 DRICH1Q6PGQ1 229 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 ZMAT2Q96NC0 199 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF317Q96PQ6 595 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 RBM15Q96T37 977 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 PTPN18Q99952 460 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 DDX56Q9NY93 547 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 TBK1Q9UHD2 729 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 NME7Q9Y5B8 376 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 COL1A2P08123 1366 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 DNALI1O14645 258 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 STRNO43815 780 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 IFNB1P01574 187 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 KDELR1P24390 212 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 HOXA11P31270 313 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 ATICP31939 592 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 PTPN7P35236 360 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 MAGEA9P43362 315 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GABRB2P47870 512 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 IFNAR2P48551 515 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GAD2Q05329 585 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 CNGA2Q16280 664 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 DUSP28Q4G0W2 176 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 C6orf89Q6UWU4 347 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 RINLQ6ZS11 566 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 POLNQ7Z5Q5 900 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 ARHGEF2Q92974 986 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 CENPTQ96BT3 561 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 PEBP4Q96S96 227 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 INTS9Q9NV88 658 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 SNTG2Q9NY99 539 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 GJD2Q9UKL4 321 aa8.37□□□□□ -1.07
PDLIM5-204ENST00000380176 C5orf60A6NFR6 353 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 SGK1O00141 431 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 CST8O60676 142 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 BANF1O75531 89 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GRAP2O75791 330 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 NPTXRO95502 500 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 PFKMP08237 780 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 PECAM1P16284 738 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MIPP30301 263 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms