RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TRAF5O00463 557 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ALOX15BO15296 676 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 PEX14O75381 377 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CHRNB2P17787 502 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CXCR2P25025 360 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CCNIQ14094 377 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 GJC2Q5T442 439 aaPredicted RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CNNM4Q6P4Q7 775 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CYFIP1Q7L576 1253 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SETD3Q86TU7 594 aaPredicted RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ARHGEF28Q8N1W1 1705 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CPSF7Q8N684 471 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 PAF1Q8N7H5 531 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 VPS37AQ8NEZ2 397 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC35G2Q8TBE7 412 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 GLMNQ92990 594 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 RILPQ96NA2 401 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 MANSC1Q9H8J5 431 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 COMMD8Q9NX08 183 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ILVBLA1L0T0 632 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 UFL1O94874 794 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ATE1O95260 518 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ACTN1P12814 892 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PRKCAP17252 672 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PSMC3P17980 439 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GRK2P25098 689 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PTGS2P35354 604 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 COILP38432 576 aaPredicted RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 MAPK10P53779 464 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GALCP54803 685 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TRAF2Q12933 501 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 STAT4Q14765 748 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 LRRC41Q15345 812 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 RARS2Q5T160 578 aaKnown RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 BTBD8Q5XKL5 378 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GALNT18Q6P9A2 607 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 KIF6Q6ZMV9 814 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GALNT7Q86SF2 657 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GPR180Q86V85 440 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PGBD4Q96DM1 585 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF486Q96H40 463 aaPredicted RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 EYA1Q99502 592 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 WNT8AQ9H1J5 351 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ANAPC5Q9UJX4 755 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 RAB26Q9ULW5 256 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PLA2G4CQ9UP65 541 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 CEP170BQ9Y4F5 1589 aaPredicted RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8QA0A0J9YX86 632 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8OA6NCC3 632 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8NF8WBI6 632 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8RI6L899 631 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ATP2A1O14983 1001 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 SPOPO43791 374 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 NDST2P52849 883 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 P2RX3P56373 397 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 MOGQ16653 247 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 SEL1L2Q5TEA6 688 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 KRT80Q6KB66 452 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 FANCBQ8NB91 859 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TTC13Q8NBP0 860 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TNIP2Q8NFZ5 429 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PEX13Q92968 403 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TSG101Q99816 390 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TRIM39Q9HCM9 518 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GMIPQ9P107 970 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PCYOX1Q9UHG3 505 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 MTMR7Q9Y216 660 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 IKBKGQ9Y6K9 419 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 KCNJ13O60928 360 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PLS3P13797 630 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 CD247P20963 164 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 MLLT3P42568 568 aaPredicted RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ITGA8P53708 1063 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GNG2P59768 71 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 KRT17Q04695 432 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 NIPAL4Q0D2K0 466 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 PTK2BQ14289 1009 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 RALGPS1Q5JS13 557 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 FGD3Q5JSP0 725 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GPR107Q5VW38 600 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 TOM1L2Q6ZVM7 507 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 GLIS3Q8NEA6 775 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 ATL1Q8WXF7 558 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 SNF8Q96H20 258 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 FBXL18Q96ME1 805 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 KLF6Q99612 283 aaPredicted RBP8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 CIB1Q99828 191 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 UQCC2Q9BRT2 126 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 HIPK3Q9H422 1215 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 NEK6Q9HC98 313 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 CD209Q9NNX6 404 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 SEPT10Q9P0V9 454 aa8.86□□□□□ -0.99
NHLRC3-201ENST00000379599 NEXMIFQ5QGS0 1516 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms