RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 MINDY3Q9H8M7 445 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 A8MUI8 341 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 SOCS7O14512 581 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 TMEM63AO94886 807 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 NFICP08651 508 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 RPL22P35268 128 aaKnown RBP20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 TFDP1Q14186 410 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 SPARCL1Q14515 664 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 ZNF268Q14587 947 aaPredicted RBP20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 TAZQ16635 292 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 ASRGL1Q7L266 308 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 FGD4Q96M96 766 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 BCO2Q9BYV7 579 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 PSMC3IPQ9P2W1 217 aaPredicted RBP20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 PCSK1NQ9UHG2 260 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 RABGEF1Q9UJ41 708 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 PHTF1Q9UMS5 762 aa20.49■□□□□ 0.87
SHROOM1-202ENST00000378676 MAGEB2O15479 319 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 TYROBPO43914 113 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 LGR5O75473 907 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 PGK2P07205 417 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 CA4P22748 312 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 NRLP54845 237 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 RIPK1Q13546 671 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 UNC45BQ8IWX7 931 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 PPIL6Q8IXY8 311 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 NAT8LQ8N9F0 302 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 GRAMD1AQ96CP6 724 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 C2orf40Q9H1Z8 148 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 LHX5Q9H2C1 402 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 SLC24A2Q9UI40 661 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 MCM8Q9UJA3 840 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 ACKR2O00590 384 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 KRT7P08729 469 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 TGFB3P10600 412 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 FGFR1P11362 822 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 CLCN3P51790 818 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 C1orf127Q8N9H9 656 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 SLC4A11Q8NBS3 891 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 FZD8Q9H461 694 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 STARD13Q9Y3M8 1113 aa20.48■□□□□ 0.87
SHROOM1-202ENST00000378676 IQCF3P0C7M6 154 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 SLC8A1P32418 973 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 PDK4Q16654 411 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 TMEM132AQ24JP5 1023 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 ZNF667Q5HYK9 610 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 GADL1Q6ZQY3 521 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 FNIP1Q8TF40 1166 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 ELOVL4Q9GZR5 314 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 MYLK2Q9H1R3 596 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 SENP1Q9P0U3 644 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 EFR3BQ9Y2G0 817 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
SHROOM1-202ENST00000378676 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 GAS2O43903 313 aaKnown RBP20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 SLC18A1P54219 525 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 MBTD1Q05BQ5 628 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 MOGSQ13724 837 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 FAM182AQ5T1J6 154 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 RGS9BPQ6ZS82 235 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 COPS5Q92905 334 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 SPON1Q9HCB6 807 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 NOP56O00567 594 aaKnown RBP20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 MED7O43513 233 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 CNMDO75829 334 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 ALADP13716 330 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 ARL4CP56559 192 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 GEMIN4P57678 1058 aaKnown RBP20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 MYO1EQ12965 1108 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 HADHQ16836 314 aaKnown RBP20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 PCGF5Q86SE9 256 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 RFX6Q8HWS3 928 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 FBXO36Q8NEA4 188 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 PYROXD1Q8WU10 500 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 HSPH1Q92598 858 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 PEBP4Q96S96 227 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 SYNCQ9H7C4 482 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 ZMYND8Q9ULU4 1186 aaPredicted RBP20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 PPP2R3BQ9Y5P8 575 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 CITO14578 2027 aa20.46■□□□□ 0.87
SHROOM1-202ENST00000378676 GPR25O00155 361 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 EDF1O60869 148 aaKnown RBP20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 MICAL2O94851 1124 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 CCNB1P14635 433 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 MIPP30301 263 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 CCDC15Q0P6D6 951 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 RASA2Q15283 850 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 RAB6CQ53S08 254 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 CELF3Q5SZQ8 465 aaKnown RBP20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 ATP11CQ8NB49 1132 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 AGAP11Q8TF27 550 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 RSAD2Q8WXG1 361 aa20.45■□□□□ 0.86
SHROOM1-202ENST00000378676 RAB6CQ9H0N0 254 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms