RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TAGLN3Q9UI15 199 aa16.6■□□□□ 0.25
CKAP4-201ENST00000378026 XPO7Q9UIA9 1087 aaKnown RBP16.6■□□□□ 0.25
CKAP4-201ENST00000378026 TMEM63AO94886 807 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 GH2P01242 217 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 PEX2P28328 305 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 GTF2BQ00403 316 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 DLGAP5Q15398 846 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 RALGPS1Q5JS13 557 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 NME8Q8N427 588 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 NCSTNQ92542 709 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 ALKBH8Q96BT7 664 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 APOPT1Q96IL0 206 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 HAPLN3Q96S86 360 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 SENP7Q9BQF6 1050 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 PLA2G4CQ9UP65 541 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 SLC4A7Q9Y6M7 1214 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 CAPN14A8MX76 684 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 BUD23O43709 281 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TGDSO95455 350 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TNNI1P19237 187 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 GNA15P30679 374 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 SERPINB6P35237 376 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 ELK3P41970 407 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TTLL12Q14166 644 aaPredicted RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 MAP7Q14244 749 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 ABCB5Q2M3G0 1257 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 APOBEC3HQ6NTF7 200 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 DCUN1D2Q6PH85 259 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 PPIL6Q8IXY8 311 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 RSAD2Q8WXG1 361 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 SRPK1Q96SB4 655 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 STRIP2Q9ULQ0 834 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 AVILO75366 819 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 ECE1P42892 770 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 OTUD4Q01804 1114 aaKnown RBP16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TRIP10Q15642 601 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 RNF111Q6ZNA4 994 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 C12orf56Q8IXR9 622 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.59■□□□□ 0.253e-9■■□□□ 11.6
CKAP4-201ENST00000378026 ACTL9Q8TC94 416 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 ADAMTS6Q9UKP5 1117 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TBX20Q9UMR3 447 aa16.59■□□□□ 0.25
CKAP4-201ENST00000378026 TRIM49D1C9J1S8 452 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 GRAMD1BQ3KR37 738 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 FAM182BQ5T319 152 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 CES4AQ5XG92 561 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 ACAD11Q709F0 780 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 LCA5Q86VQ0 697 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 PDSS2Q86YH6 399 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 PDIK1LQ8N165 341 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 PPM1NQ8N819 430 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 ABTB1Q969K4 478 aaPredicted RBP16.58■□□□□ 0.24
CKAP4-201ENST00000378026 CFAP36Q96G28 342 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 RPL22P35268 128 aaKnown RBP16.58■□□□□ 0.24
CKAP4-201ENST00000378026 NOMO3P69849 1222 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 BMPR2Q13873 1038 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 HIC1Q14526 733 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 XKR9Q5GH70 373 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 WDR44Q5JSH3 913 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 S100A14Q9HCY8 104 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 RPS6KL1Q9Y6S9 549 aa16.58■□□□□ 0.24
CKAP4-201ENST00000378026 TNRC6CQ9HCJ0 1690 aaKnown RBP16.58■□□□□ 0.24
CKAP4-201ENST00000378026 hCG_1818297A0A087WSY0 165 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 G3V3G9 751 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 DHRS4L1P0CG22 281 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 VCLP18206 1134 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 PEX6Q13608 980 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 FAM71DQ8N9W8 422 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 TEKT1Q969V4 418 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 E2F7Q96AV8 911 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 PPCSQ9HAB8 311 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 FARP1Q9Y4F1 1045 aaPredicted RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 SNCAIPQ9Y6H5 919 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 TCRBV9S1A1TA0A576 114 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 PABPC4LP0CB38 370 aaKnown RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 YWHABP31946 246 aaKnown RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 CYP24A1Q07973 514 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 R3HDM1Q15032 1099 aaKnown RBP16.57■□□□□ 0.24
CKAP4-201ENST00000378026 ZNF394Q53GI3 561 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
CKAP4-201ENST00000378026 CIAPIN1Q6FI81 312 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms