RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 MECRQ9BV79 373 aa18.87■□□□□ 0.61
GNE-201ENST00000377902 VPS11Q9H270 941 aa18.87■□□□□ 0.61
GNE-201ENST00000377902 C17orf75Q9HAS0 396 aa18.87■□□□□ 0.61
GNE-201ENST00000377902 RGS20O76081 388 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 MT-ND3P03897 115 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 MYL2P10916 166 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 TNFSF9P41273 254 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 HIRAP54198 1017 aaPredicted RBP18.86■□□□□ 0.61
GNE-201ENST00000377902 SCARA5Q6ZMJ2 495 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 CDHR3Q6ZTQ4 885 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 EMC1Q8N766 993 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 NMUR2Q9GZQ4 415 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 PCSK1NQ9UHG2 260 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 GNAT1P11488 350 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 ELK3P41970 407 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 RASA2Q15283 850 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 KBTBD12Q3ZCT8 623 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 ZC3H18Q86VM9 953 aaKnown RBP18.86■□□□□ 0.61
GNE-201ENST00000377902 KBTBD2Q8IY47 623 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 TEKT4Q8WW24 435 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 RSAD2Q8WXG1 361 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 SSU72Q9NP77 194 aaKnown RBP18.86■□□□□ 0.61
GNE-201ENST00000377902 CNTN6Q9UQ52 1028 aa18.86■□□□□ 0.61
GNE-201ENST00000377902 WDR81Q562E7 1941 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PCNTO95613 3336 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 TM9SF1O15321 606 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PSMG1O95456 288 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 ESRRAP11474 423 aaPredicted RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 ETV4P43268 484 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 CDK16Q00536 496 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PTK7Q13308 1070 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 THOC5Q13769 683 aaKnown RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 PRKD1Q15139 912 aaPredicted RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 LRRC74BQ6ZQY2 392 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 ZNF398Q8TD17 642 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 TSC22D3Q99576 134 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 H0YIN7 160 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 NR3C2P08235 984 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PSMA2P25787 234 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 SPDYAQ5MJ70 313 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PPP1R15BQ5SWA1 713 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 LRRC38Q5VT99 294 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 PRPF39Q86UA1 669 aaKnown RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 MCPH1Q8NEM0 835 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 ATP6V0A1Q93050 837 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 CLPTM1LQ96KA5 538 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 ARHGEF4Q9NR80 690 aa18.85■□□□□ 0.61
GNE-201ENST00000377902 COL2A1P02458 1487 aaPredicted RBP18.85■□□□□ 0.61
GNE-201ENST00000377902 TCRBV9S1A1TA0A576 114 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 FCHO1O14526 889 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 LMNAP02545 664 aaKnown RBP18.84■□□□□ 0.61
GNE-201ENST00000377902 KCNA2P16389 499 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 ZNF132P52740 706 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 MYL6P60660 151 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 KLHL38Q2WGJ6 581 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 C11orf91Q3C1V1 193 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 CES4AQ5XG92 561 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 NPNTQ6UXI9 565 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 K7ERI5 159 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 LRCH4O75427 683 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 ASNSP08243 561 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 SLC25A11Q02978 314 aaKnown RBP18.84■□□□□ 0.61
GNE-201ENST00000377902 SLC34A1Q06495 639 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 ORC1Q13415 861 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 EMC2Q15006 297 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 HSF5Q4G112 596 aaPredicted RBP18.84■□□□□ 0.61
GNE-201ENST00000377902 FOXB2Q5VYV0 432 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 ZBTB33Q86T24 672 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 SH3TC2Q8TF17 1288 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 LRRN4Q8WUT4 740 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 MTMR12Q9C0I1 747 aa18.84■□□□□ 0.61
GNE-201ENST00000377902 KBTBD13C9JR72 458 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 CALB1P05937 261 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 KITP10721 976 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 TBXAS1P24557 533 aaPredicted RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 GCLCP48506 637 aaPredicted RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 PIGHQ14442 188 aaPredicted RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 OR52E8Q6IFG1 317 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 PCGF5Q86SE9 256 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 VSIG10LQ86VR7 867 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 TREML1Q86YW5 311 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 OXNAD1Q96HP4 312 aaPredicted RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 CGRRF1Q99675 332 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 DDX50Q9BQ39 737 aaKnown RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 CYTH4Q9UIA0 394 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 C2CD2Q9Y426 696 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 DHRS4L1P0CG22 281 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 NEK3P51956 506 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 ACTR2P61160 394 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 GHRHRQ02643 423 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 CMPK2Q5EBM0 449 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 SH2D5Q6ZV89 423 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 PDIK1LQ8N165 341 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 PDCD7Q8N8D1 485 aaKnown RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 PPCSQ9HAB8 311 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms