RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 BPIFB4P59827 614 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 EEF1DP3Q658K8 133 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 FOXR1Q6PIV2 292 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 GPR142Q7Z601 462 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 LINC00469Q8N7U9 141 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 CASKIN2Q8WXE0 1202 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 C16orf70Q9BSU1 422 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 NUP85Q9BW27 656 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 AP1M1Q9BXS5 423 aa13.09□□□□□ -0.31
CEACAM1-205ENST00000377806 COL1A2P08123 1366 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 FAM155AB1AL88 458 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 M0QX08 132 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 SKAP2O75563 359 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 RBP3P10745 1247 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 COMTP21964 271 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 TBXAS1P24557 533 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ALDH3A1P30838 453 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 MLH1P40692 756 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ADCYAP1R1P41586 468 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 TSPAN7P41732 249 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 CARSP49589 748 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 EPHB4P54760 987 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 CENPCQ03188 943 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 AMHR2Q16671 573 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 EMBQ6PCB8 327 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 CPNE8Q86YQ8 564 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 MCOLN2Q8IZK6 566 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 KRT35Q92764 455 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 DPF3Q92784 378 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ZCCHC17Q9NP64 241 aaKnown RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 WDR35Q9P2L0 1181 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 TIMM22Q9Y584 194 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
CEACAM1-205ENST00000377806 A6NJR5 290 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 AGPSO00116 658 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 KRIT1O00522 736 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 MEFVO15553 781 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 B4GALT4O60513 344 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SNX2O60749 519 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SMIM24O75264 130 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 STAMBPO95630 424 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CTNNA2P26232 953 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 DR1Q01658 176 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 NNTQ13423 1086 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SURF1Q15526 300 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 EIF1ADQ8N9N8 165 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CDKL2Q92772 493 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SNF8Q96H20 258 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 ZNF668Q96K58 619 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 GDAP1L1Q96MZ0 367 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 YIPF3Q9GZM5 350 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CDT1Q9H211 546 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SLITRK6Q9H5Y7 841 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 PCDHGB3Q9Y5G1 929 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 ESYT3A0FGR9 886 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 MAGEB2O15479 319 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 FGGP02679 453 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CFHP08603 1231 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SMPD1P17405 629 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 BTF3P20290 206 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 ECHS1P30084 290 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 MESDQ14696 234 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 TRADDQ15628 312 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 FAM110CQ1W6H9 321 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
CEACAM1-205ENST00000377806 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.324e-9■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms