RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PDE11AQ9HCR9 933 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 KBTBD4Q9NVX7 518 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 GDAP2Q9NXN4 497 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 GTF3C4Q9UKN8 822 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 CFAP45Q9UL16 551 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 MAGED2Q9UNF1 606 aaPredicted RBP20.55■□□□□ 0.88
CBWD3-204ENST00000377349 GABRDO14764 452 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 EGFP01133 1207 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 ADRB1P08588 477 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 PDIA4P13667 645 aaKnown RBP20.54■□□□□ 0.88
CBWD3-204ENST00000377349 FAM26FQ5R3K3 315 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 LIMS2Q7Z4I7 341 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 TMEM86AQ8N2M4 240 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 CSGALNACT2Q8N6G5 542 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 MRPS31Q92665 395 aaKnown RBP20.54■□□□□ 0.88
CBWD3-204ENST00000377349 EZH1Q92800 747 aaPredicted RBP20.54■□□□□ 0.88
CBWD3-204ENST00000377349 MTMR12Q9C0I1 747 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 ITGA11Q9UKX5 1188 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 PTPRJQ12913 1337 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 PI4KAP42356 2102 aa20.54■□□□□ 0.88
CBWD3-204ENST00000377349 CCDC163A0A0D9SF12 145 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 ZNF77Q15935 545 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 GRAMD1CQ8IYS0 662 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CEP57L1Q8IYX8 460 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 GAB3Q8WWW8 586 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CEP295Q9C0D2 2601 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 FRYQ5TBA9 3013 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 HUS1O60921 280 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 RNF40O75150 1001 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CLSTN1O94985 981 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 RAP1GAPP47736 663 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CYP2J2P51589 502 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 GRSF1Q12849 480 aaKnown RBP eCLIP20.53■□□□□ 0.88
CBWD3-204ENST00000377349 USP4Q13107 963 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 SOWAHAQ2M3V2 549 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CFAP221Q4G0U5 840 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CEP68Q76N32 757 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 TOP6BLQ8N6T0 577 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 RDH13Q8NBN7 331 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 SPATA18Q8TC71 538 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 CYP2S1Q96SQ9 504 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 SNX9Q9Y5X1 595 aa20.53■□□□□ 0.88
CBWD3-204ENST00000377349 ZFHX4Q86UP3 3567 aa20.52■□□□□ 0.88
CBWD3-204ENST00000377349 MYH10P35580 1976 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 GJA4P35212 333 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 GALK1P51570 392 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 RPL10AP62906 217 aaKnown RBP20.52■□□□□ 0.87
CBWD3-204ENST00000377349 MYL7Q01449 175 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 FAM160A1Q05DH4 1040 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 MTF1Q14872 753 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 PPM1JQ5JR12 505 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 RESP18Q5W5W9 173 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 FAM171BQ6P995 826 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 KBTBD6Q86V97 674 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 CBWD2Q8IUF1 395 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 ADGRF2Q8IZF7 708 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 OR5B17Q8NGF7 314 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 KBTBD7Q8WVZ9 684 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 ANKRD36BP1Q96IX9 119 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 CHAMP1Q96JM3 812 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 MAGEF1Q9HAY2 307 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 SLC39A2Q9NP94 309 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 HSPBP1Q9NZL4 362 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 GCNT4Q9P109 453 aa20.52■□□□□ 0.87
CBWD3-204ENST00000377349 ZNF233A6NK53 670 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 CLIC2O15247 247 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 ATP2C2O75185 946 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 RPP40O75818 363 aaKnown RBP20.51■□□□□ 0.87
CBWD3-204ENST00000377349 EPN2O95208 641 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 TNNC2P02585 160 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 RBP5P82980 135 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 CUL4BQ13620 913 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 PDGFRLQ15198 375 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
CBWD3-204ENST00000377349 C7orf25Q9BPX7 421 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 ECT2Q9H8V3 914 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 RXFP3Q9NSD7 469 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 UXTQ9UBK9 157 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-204ENST00000377349 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
CBWD3-204ENST00000377349 C2orf78A6NCI8 922 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 AXIN1O15169 862 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 EIF3DO15371 548 aaKnown RBP eCLIP20.5■□□□□ 0.87
CBWD3-204ENST00000377349 DLATP10515 647 aaKnown RBP20.5■□□□□ 0.87
CBWD3-204ENST00000377349 HOXD13P35453 343 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 LHX1P48742 406 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 SF3A2Q15428 464 aaKnown RBP20.5■□□□□ 0.87
CBWD3-204ENST00000377349 CCDC6Q16204 474 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 EML3Q32P44 896 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 UNC13DQ70J99 1090 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 OSCP1Q8WVF1 389 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 LOXL4Q96JB6 756 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 P2RY13Q9BPV8 354 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 ARRDC1-AS1Q9H2J1 176 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 TRPC7Q9HCX4 862 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 INTS13Q9NVM9 706 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 WNT6Q9Y6F9 365 aa20.5■□□□□ 0.87
CBWD3-204ENST00000377349 ATG13O75143 517 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 DRD1P21728 446 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 LMO2P25791 158 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms